Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1914 ATGGCGACACATGCCAATGGAGTTGAGTCTTTATCAGAGGTTCAGAATTCAGTTTCTGCGACAGATACCGATCTTCCTTCAACATTTCGGGACCCTCGGCCCCCCCTGCCTCCCCTGAAAAATCATGGGGTTTCTTCCTTATCTCATTTTACTGGTCACGATGGCTATGGAACGAGGACCATCCATCGTCCCAAGAGTTGTGCACTCAATCCAAGGCATTCTTATCAGGAGGCCAACAATGTGCAGCTTGGAGAATTACCACATATGTCAAAGCAGTTCTACAATTGTGGTGGAAAATCTGGCTGTGGGAGCCTCACTGAAACTGGAGAAACTTGTTTCCGGAAGAACATCTCGACGATTGGACCATTTGATAGTTCCAAGAATTGTGACTCAAGTAGCAGATTAGAATCTGAGAACTTTGTCCTAGGCTCATCAAATCAAACCAAGAGTTACTGTCAGTCAGATGTTACTTTTTGTCCTAGTCCTCAGAGTAGCTTATATTCTGCTACTGTCTATTCAGAAGCCAAACAAAGTTTTACTAATACTGAATTCAGTGAAGCTGTTAGTGTTGATAAGTCAGGTGAAATTGGTGAAGTTACTAATTCGTCTTATTTTAACGAAAGCAGGAAGACCAACATCTGTAGAGGGAGTACTGGAAGTGATGTTAGTGACGAAAGCAGCACCAGTACTTTAAGCAGTTCTTTGTATAAACCCCACAAAGCAAATGATGAAAGATGGGAAGCAATTCAAGCGATCCGAGCTCGTGATGGGATCTTGGAATTGAGACATTTCAGGCTGTTAAAGAGTTTGGGATGTGGAGACATTGGAAGTGTTTATCTAGCTGAGTTGAGTCGCACAGGTACTTGTTTTGCCATGAAAATTATGAATAAAACAAGGCTAGCAAATCGCAAGAAGCTTCTGAGGGTTCAGACAGAAAGAGAGATATTGCAATCTCTGGATCATCCATTTCTGCCCACATTATATACGCACTTTGAGACAGAGGCATTCTCTTGCCTGGTAATGGAGTTCTGCCCTGGTGGGGACCTAAATGCACTCAGGCAAAGACAACCTGGGAAATATTTTTTAGAGCACGCTGCCAGGTTAGCAATTCTTTTTCCTGCTTTTCCCTGCAAGTTATACGTGTTCCATGCAGACGTATACAAGCAAGGATGGCTGAATGGCAAACCTGATATTAAATATTTCCATATTCTTTATATCATGTACTCAAATGTGCCATTGCATCAGAAGGGAACTGTAGTAGTGCTGGTGCAGGAAACATCTCTCTTCCAATGGATTTCAGGAATAGTTTATCTGGAGACAGGTTTTCATGATATGAATGGAAACCCAGGCTCTGACTGA 1359 0.4253 MATHANGVESLSEVQNSVSATDTDLPSTFRDPRPPLPPLKNHGVSSLSHFTGHDGYGTRTIHRPKSCALNPRHSYQEANNVQLGELPHMSKQFYNCGGKSGCGSLTETGETCFRKNISTIGPFDSSKNCDSSSRLESENFVLGSSNQTKSYCQSDVTFCPSPQSSLYSATVYSEAKQSFTNTEFSEAVSVDKSGEIGEVTNSSYFNESRKTNICRGSTGSDVSDESSTSTLSSSLYKPHKANDERWEAIQAIRARDGILELRHFRLLKSLGCGDIGSVYLAELSRTGTCFAMKIMNKTRLANRKKLLRVQTEREILQSLDHPFLPTLYTHFETEAFSCLVMEFCPGGDLNALRQRQPGKYFLEHAARLAILFPAFPCKLYVFHADVYKQGWLNGKPDIKYFHILYIMYSNVPLHQKGTVVVLVQETSLFQWISGIVYLETGFHDMNGNPGSD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1914 452 SMART serkin_6 264 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1914 452 PANTHER FLIPPASE KINASE 1-RELATED 156 367 - -
Dere02g1914 452 Gene3D Phosphorylase Kinase; domain 1 258 371 - -
Dere02g1914 452 Pfam Protein kinase domain 265 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1914 452 MobiDBLite consensus disorder prediction 215 235 - -
Dere02g1914 452 MobiDBLite consensus disorder prediction 1 26 - -
Dere02g1914 452 ProSiteProfiles Protein kinase domain profile. 264 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1914 452 MobiDBLite consensus disorder prediction 1 43 - -
Dere02g1914 452 FunFam Serine/threonine-protein kinase D6PK-like 262 347 - -
Dere02g1914 452 SUPERFAMILY Protein kinase-like (PK-like) 239 360 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1914 Dere-ChrDere02 18787767 18789125 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1914 150 421 AGC Kinase Gene Family AT5G47750 51.579 1.38e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g1914 Pkinase 2.7e-15 CL0016