Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1913 ATGGATCCCCTGCTTCAATACCCTACTTCTTGTTCCACTTGCAGTCTTGTGAATGCTATGACTAGCTTCTATCACCTCCAGACGGTTCTTGCACGGCATTTATTATTTGATGTCCGAAATGGTACCACCAACTGTATTGTTGTTTCATCGATCAGCACTGTGCTATGCAGGTTTTATGCGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTAGGGATCATCTACAGAGACCTTAAACCTGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGTTGTCAGATTTTGACCTCTCTCTGAGGTGCTCAGTCAGCCCAACTCTAGTAAAACCATCAAACTCTAACATGGAGACAAAAAGCTCAGGATACTGCACTCAGCCTGCCTGCATAGAACCAACTTGTGTAATGCAGCCAGATTGCATCCAACCTACATGCTTTACACTGCGTTCACGATCTGGAAATTCCAAGAAAGGAAAGAAGTTGAAATCAAAGAATGAAATGCATTATCAGGCAACCCCACTTCCCGAGCTCATCGCAGAGCCAACAAATGCACGGTCAATGTCCTTTGTGGGAACACATGAGTACTTAGCACCAGAAATTATTAAAGGAGAAGGACATGGCAGTGCAGTGGACTGGTGGACTTTTGGAATATTCTTATATGAGCTCTTGTTTGGTAGAACACCATTCAAAGGTTCAGCACATCGAGCAACTCTGTTTAATGTGATTGGCCAGCCCTTGAGTTTTCCAGAATCTCCTAGCGTCAGCTTTGCTGCTAGAGACTTGATAAGAGGTCTACTTGTGAAAGAGCCTCAGCATCGTCTTGCCTACAGACGTGGAGCTACAGAACTGAAACAACATCCATTCTTTCAGAACGTTAATTGGGCACTAATCCGTTGTACACGTCCTCCAGAGATCCAAGGAAAGGCCATCAGAGCAGTCACAGTTGAAAAGCTTGGTGGTCATGGTTTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1014 0.4389 MDPLLQYPTSCSTCSLVNAMTSFYHLQTVLARHLLFDVRNGTTNCIVVSSISTVLCRFYAAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCSVSPTLVKPSNSNMETKSSGYCTQPACIEPTCVMQPDCIQPTCFTLRSRSGNSKKGKKLKSKNEMHYQATPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSAHRATLFNVIGQPLSFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATELKQHPFFQNVNWALIRCTRPPEIQGKAIRAVTVEKLGGHGLKPSGNYLDIDFF 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1913 337 Pfam Protein kinase domain 34 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1913 337 Pfam Protein kinase domain 188 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1913 337 PANTHER FLIPPASE KINASE 1-RELATED 55 310 - -
Dere02g1913 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 75 87 IPR008271 GO:0004672|GO:0006468
Dere02g1913 337 Gene3D Transferase(Phosphotransferase) domain 1 50 104 - -
Dere02g1913 337 FunFam serine/threonine-protein kinase D6PK-like 186 309 - -
Dere02g1913 337 ProSiteProfiles Protein kinase domain profile. 1 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1913 337 Gene3D Transferase(Phosphotransferase) domain 1 185 301 - -
Dere02g1913 337 SMART serkin_6 10 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1913 337 SUPERFAMILY Protein kinase-like (PK-like) 50 306 IPR011009 -
Dere02g1913 337 FunFam Serine/threonine-protein kinase OXI1 47 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1913 Dere-ChrDere02 18785992 18787353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1913 56 337 AGC Kinase Gene Family AT3G27580 71.523 1.26e-151 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Dere02g1913 Pkinase 3.5e-21 CL0016