Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1909 ATGTATGATTTTGGAGTGGCTAATGAAAGTGAAAAGAGAGGGAGAAAGTTTATATTTGGCTACCCTGACGTGCCGATCACTTTGCCGTGTAGCTTCGTCATGAAGCCATGTTTATGCAAAGTGAACACATCCACTATGAAAATTTTGCGGTTTCCAAAATTTATTCTCGCCGTTGCCGGGGATCGAACCCGGGTCGCCCGCGTGACAGGCGGGAATACTCACCACTATACTACAACGACTCGATGTGAAGAGTTTAATATCTCTCTCGAATGCGATTTTGGTTTCGTCTTCTTGTTTCTCGATAGTATGGCTAGGAGCTGGCTAATTGATATAGGAGGATTTGCAAAGAAAGTGAAAAGCAGTTCCTTGTCCTCTGCTGATCAAATCAAAGACTCTGGAGCTTATCGTGAATGCCCAAATTGTCATTGGCATATTGATAACAGTGATGTTTCTCCTGAGTGGCCTGGCTTTCCAGCTGGTGTAAAATTTGATCCTTCTGACGCAGAGCTCTTAGAACATTTAGCAGCAAAATGTGGCATTGGGAACACGGAGCCACACACGTTTATCCATGAGTTCATCCCAACTCTTGAGGGAGACCAGGGTATTTGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGAGCAGTGTCCATTTTTTTCATAGAACAATTAATGCATATGCTTGTGGTCAACGAAAGCGTCGAAAGATTCATCATCAACATGGTTCAACTGAGGAGCATGTGCGGTGGCACAAGACAGGTAAAACCAAATCTGTTATAGAAGATGGAGTACATAAAGGCTTTAAAAAGATCATGGTTCTTTATGTAAGATCTGAGAAAGGGTCCAAGCCATATAAATCCAACTGGGTGATGCATCAATACCACCTGGGAACTGAAGAAGATGAGAAGGATGGTGAATATGTAGTTTCAAAAGTTTTTTATCAGCAGAAGCAGATTGAGAAAATTGAAGAGAATCTGTTAGTTGAAGAATCAGATAATATGACATCACGAACGAGTCCAAGGACCCCAAATCCAAATCCGCGCAATCCACCTCGGCCAGGAAATTCTGCTGACTGTGATGATCATTTCAATGAACAAGTACTTCTGTCATTCGCCAAGGATGCCAAGTCTGTCCCTGGAGAGTCAAGTGCCCAACCAACTGATGTTCAGGATGATGACCACAGGACTGACCCTGCATGGTTGGCTGGTGAGTCACAGGCTGTTGAAACCTCTGACTTTGATGGTTTGGATGATATATTATTGTGCAAGGAGATCTTGGACTCTTCTGCACTCTTAAATGATTCTGGATTGAACTCAACCACGATCAATGGCTTTGCTTGCAACACAACCTTGTTGGCTGGAAATGATAATGCATCCTTTGGAATATCTGACCTGGATAGCCTGGAGTTGGATACTCCTCCAGATTTCCAACTTTCTAATTTGCAATTTTGTTCTCAAGACAGTATACTTGACTGGATAGACAGGATATGA 1500 0.428 MYDFGVANESEKRGRKFIFGYPDVPITLPCSFVMKPCLCKVNTSTMKILRFPKFILAVAGDRTRVARVTGGNTHHYTTTTRCEEFNISLECDFGFVFLFLDSMARSWLIDIGGFAKKVKSSSLSSADQIKDSGAYRECPNCHWHIDNSDVSPEWPGFPAGVKFDPSDAELLEHLAAKCGIGNTEPHTFIHEFIPTLEGDQGICYTHPENLPGAKKDGSSVHFFHRTINAYACGQRKRRKIHHQHGSTEEHVRWHKTGKTKSVIEDGVHKGFKKIMVLYVRSEKGSKPYKSNWVMHQYHLGTEEDEKDGEYVVSKVFYQQKQIEKIEENLLVEESDNMTSRTSPRTPNPNPRNPPRPGNSADCDDHFNEQVLLSFAKDAKSVPGESSAQPTDVQDDDHRTDPAWLAGESQAVETSDFDGLDDILLCKEILDSSALLNDSGLNSTTINGFACNTTLLAGNDNASFGISDLDSLELDTPPDFQLSNLQFCSQDSILDWIDRI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1909 499 FunFam NAC domain-containing protein 8 166 322 - -
Dere02g1909 499 ProSiteProfiles NAC domain profile. 157 318 IPR003441 GO:0003677|GO:0006355
Dere02g1909 499 MobiDBLite consensus disorder prediction 378 400 - -
Dere02g1909 499 Pfam No apical meristem (NAM) protein 158 299 IPR003441 GO:0003677|GO:0006355
Dere02g1909 499 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 105 412 IPR044799 GO:0003700
Dere02g1909 499 SUPERFAMILY NAC domain 142 318 IPR036093 GO:0003677|GO:0006355
Dere02g1909 499 Gene3D NAC domain 166 324 IPR036093 GO:0003677|GO:0006355
Dere02g1909 499 MobiDBLite consensus disorder prediction 329 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1909 Dere-ChrDere02 18734141 18739666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1909 138 318 NAC Transcription Factor Family AT1G28470 57.143 1.72e-63 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g1909 NAM 2.6e-20 No_clan