Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1860 ATGGTTGCTTTATTATTATTGCAGGCCCAATCCTTTATGTCATCTATCATCAAAAAGAAAGATGATGCCAGCTCTACTGGGAGCAGGTCCTTAAGAGCACTTGCATTAATTGGAGCTGGTGTCTCAGGATTTTTGAGTTTTGCAACAACTGCATCAGCTGATGAGGCTGAGGAAGGCCTGGAATGTCCAAGCTATCCATGGCCTCATGCGGGTATCCTCAGTTCATACGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATCAACAAGTCTGTGCTTCCTGTCATTCTATGTCCTTGATATCATACCGTGATTTGGTTGGTGTCGCTTATACAGAAGAAGAGGTTAAGGCTATGGCAGCTGAGATTGAAGTAGCTGATGGCCCTAATGATGAGGGTGAGATGTTTACCCGCCCTGGTAAACTCAGTGATCGCTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGGTTTGCTAATGGAGGAGCGTATCCTCCAGATCTAAGTCTTATTACCAAAGCTCGTCACAATGGTCAAAACTATGTATTTTCCCTTTTAACTGGTTATCGTGATCCCCCTGCTGGTGTTTCGATTAGAGAGGGGCTGCATTATAATCCTTATTTTCCTGGAGGAGCAATTGCCATGCCTAAGATGCTTAATGATGGTGCTGTTGAATATGAAGATGGTACTCCTGCTACAGAATCTCAGATGGGAAAAGATGTTGTGACATTCTTAACCTGGGCGGCCGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTCGTACTATCTCTGGCTCTATTTCAGGCTGCATATTTCCGACGCTTGAGGTGGTCAGTTCTGAAGTCTCGCAAGCTGGTTCTTGATGTTGTCAACTAG 891 0.4433 MVALLLLQAQSFMSSIIKKKDDASSTGSRSLRALALIGAGVSGFLSFATTASADEAEEGLECPSYPWPHAGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVADGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFSLLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATESQMGKDVVTFLTWAAEPEMEERKLMGFKWIFVLSLALFQAAYFRRLRWSVLKSRKLVLDVVN 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1860 296 FunFam Cytochrome c1, heme protein, mitochondrial 252 296 - -
Dere02g1860 296 FunFam Cytochrome c1, heme protein 56 251 - -
Dere02g1860 296 Gene3D - 252 295 - -
Dere02g1860 296 ProSiteProfiles Cytochrome c family profile. 79 186 IPR009056 GO:0009055|GO:0020037
Dere02g1860 296 SUPERFAMILY Cytochrome c 60 250 IPR036909 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 251 266 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 163 187 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 85 104 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 212 231 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 201 212 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 130 150 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 65 84 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PRINTS Cytochrome C1 signature 232 251 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 PANTHER CYTOCHROME C1 18 294 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 Pfam Cytochrome C1 family 67 283 IPR002326 GO:0009055|GO:0020037
Dere02g1860 296 Gene3D - 56 251 IPR036909 GO:0009055|GO:0020037
Dere02g1860 296 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 251 295 IPR021157 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1860 Dere-ChrDere02 18335730 18338094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1860 7 296 Chloroplast and Mitochondria Gene Families AT3G27240 83.784 1.22e-172 478