Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1848 ATGCTCCTAGCTGGTTCAATGAGATATTTTTACCTTTATCTTCTGGGTCTTTCCTGGTTTTTGTATATCCAAAGCACCCATGAACTGCAGGCTGCTCATACCCAAGTCTTGTTACAGTTAAAGAAGTATCTAGAGAACCCTGCCTCCTTGGGAATTTGGGAAAATTATGATGGAGACTTCTGTACCATCTCTCCATCTGCACGTATGAGCATTAAATGTGAGGATAATTCTGTAACCGAGCTTAAAATAATGGGAGATAAACTTGTGAAGGTTAAAGAGTTCAATGGGTTAGCAATTCCTAATCAAACATTGTCTGTGAGCTTTTCTATTGATTCTTTTGTCACCACATTAGTCAGGTTAACCAGCTTGAGGGTTCTAAGCTTGGTGTCATTGGGGATTTGGGGGCCACTCCCTGATAAGATTCATCGTTTATCTTTACTTGAAATTCTAGACTTGAGCTCAAATTTCTTATACGGTTCAATCCCTCCAAAAATATCTACCATGGTAAACCTTTATACACTAACACTTAATGCCAATTATTTTAATAGCACCATGCCTTATTGGTTTGATTCGTTATCTAATCTACATGCTTTGAGTTTGAATAACAACCACTTGAAGGGTTCTTTCCCTTTCTCATTATGCAAAATTAAGACGCTCACTGATATTTCCTTGTCTCACAATGACTTGTTGGGAAAATTGCCTGATCTGAGTGATCTCACTGGCTTACATGTGCTGAATTTAGGAGAAAATCACTTTGACTCTGAACTACCATTAATGCCCAAATCAGTAGTTACGGTTCTCCTAAGTAAAAATTCATTCTCTGGCAAGATACCCAAGCAGTTTGGTGATTTGGATCAGCTTCAACATCTAGACCTTTCATCGAATCATCTAAGTGGGATTCCCCCATCCACCTTGTTCTCTTTGCCAAACATCAGTTATATGGATTTGGCAAGCAACATTCTGAGCGGGTCCCTTCCAAACAAACTGAGTTGTGGAAGCAAACTTGGATATGTGGATATTTCTAGTAACAAATTAATTGGTGGACTTCCTTCTTGCTTGGCAAGCACGTCTGATAGAAGAGTTGTGAAATATGGTGGGAATTGTTTAACCGTTGATTCTCAAGAATCTCAACATCAGAAGCAAGGGTCATATTGTAACGAAACCGGTGCCAAGAAGCTCTGGGCACTGAAAATAGCTACAATTGTGGCCATCGCTATTGGACTTGTTCTCATTCTCGTGCCTTTTGTGTTTGGAGTTTTCATTTGTCGTAAAAGATACCATTTGAGAAAGACATCTCGACAGCACACGTTGCCCAAGAGTGTGCAAGATAATTCCACAACAGGGGTTTCCTCTGAACTCCTTGCAAGTGCCAGATTTATTTCTCAATCAGTGAAGCTTGGGACACAAGCTAATCCAGTATGTCGACTGTTTTCAATTGACGAGTTGAGGGAAGCCACCAAAGATTTTCACTTATCAACTTATATGGGTGAAGGCTCCATAGGGAAGCTGTACAAGGGCAAACTGGATATTGGATCCTATGTGGCAATAAGATCTTTGCCTCTGTCAAAGAAATGCTCAATTCAAAACCTTAAAGGTCGGTTGGATTTACTCTCAAAGCTTCACCATCCAAATTTGGTCAGCCTATTGGGTTATTGTATAGATGGTGGTGAACAAGATGATTCTAGTACCGCCAAACTTCACCTTGTATATGAGTATGTGCCAAATGGGAATTATCGTGCCTATCTGTCAGAATTTTCTCCAGAGAAGGCACTTAAGTGGTCAGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCTGTGCATTTCTTACATACTGGGGTTATTCCTGGCTGTTTTAGTAACCAATTAAAAACAAATAATATTTTGCTTGATGAGCATCGCATTCCCAAACTAAGTGATTATGGGACGTCCATCGTCAGAGAAGAGATTGAAAAGCTCGAGGCAAAGGGAGAAAGCACATTTTCATGCCAAAGGACAACATTGGAGGATGATGTTTACAATTTCGGATTCATATTGTTTGAATCACTTGTTGGAACCATAGCAAGAGGGAAAGATGAAGAATATTTCCTCAATGAAAAGGCATCCTTTGGAAGTCAAGATGGTCGAAGAAAAATTGTGGATCCAGTGGTTTTGACCACCTGCTCTCAAGAGTCATTATCAATTGCAGTATCTATAACAACCAAATGCATATCCCCAGAACCATCATCCCGTCCCTCTTTCGAGGATGTCCTATGGAACTTACAGTACGCAGCTCAAGTCCAGGCCACAGCAGATGCAGATCAAAAATCAGATTCTACATGA 2322 0.4014 MLLAGSMRYFYLYLLGLSWFLYIQSTHELQAAHTQVLLQLKKYLENPASLGIWENYDGDFCTISPSARMSIKCEDNSVTELKIMGDKLVKVKEFNGLAIPNQTLSVSFSIDSFVTTLVRLTSLRVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLYGSIPPKISTMVNLYTLTLNANYFNSTMPYWFDSLSNLHALSLNNNHLKGSFPFSLCKIKTLTDISLSHNDLLGKLPDLSDLTGLHVLNLGENHFDSELPLMPKSVVTVLLSKNSFSGKIPKQFGDLDQLQHLDLSSNHLSGIPPSTLFSLPNISYMDLASNILSGSLPNKLSCGSKLGYVDISSNKLIGGLPSCLASTSDRRVVKYGGNCLTVDSQESQHQKQGSYCNETGAKKLWALKIATIVAIAIGLVLILVPFVFGVFICRKRYHLRKTSRQHTLPKSVQDNSTTGVSSELLASARFISQSVKLGTQANPVCRLFSIDELREATKDFHLSTYMGEGSIGKLYKGKLDIGSYVAIRSLPLSKKCSIQNLKGRLDLLSKLHHPNLVSLLGYCIDGGEQDDSSTAKLHLVYEYVPNGNYRAYLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFSNQLKTNNILLDEHRIPKLSDYGTSIVREEIEKLEAKGESTFSCQRTTLEDDVYNFGFILFESLVGTIARGKDEEYFLNEKASFGSQDGRRKIVDPVVLTTCSQESLSIAVSITTKCISPEPSSRPSFEDVLWNLQYAAQVQATADADQKSDST 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1848 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 452 572 - -
Dere02g1848 773 ProSiteProfiles Leucine-rich repeat profile. 286 307 IPR001611 GO:0005515
Dere02g1848 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 263 390 - -
Dere02g1848 773 Gene3D Ribonuclease Inhibitor 263 393 IPR032675 -
Dere02g1848 773 SMART LRR_typ_2 144 168 IPR003591 -
Dere02g1848 773 SMART LRR_typ_2 284 307 IPR003591 -
Dere02g1848 773 SMART LRR_typ_2 239 262 IPR003591 -
Dere02g1848 773 SMART LRR_typ_2 192 215 IPR003591 -
Dere02g1848 773 Gene3D Phosphorylase Kinase; domain 1 451 572 - -
Dere02g1848 773 Gene3D Transferase(Phosphotransferase) domain 1 573 773 - -
Dere02g1848 773 ProSiteProfiles Protein kinase domain profile. 489 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1848 773 Pfam Leucine rich repeat 264 319 IPR001611 GO:0005515
Dere02g1848 773 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Dere02g1848 773 Pfam Protein tyrosine and serine/threonine kinase 490 752 IPR001245 GO:0004672|GO:0006468
Dere02g1848 773 Gene3D Ribonuclease Inhibitor 30 262 IPR032675 -
Dere02g1848 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 573 773 - -
Dere02g1848 773 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 103 755 - -
Dere02g1848 773 SUPERFAMILY Protein kinase-like (PK-like) 471 754 IPR011009 -
Dere02g1848 773 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 30 261 - -
Dere02g1848 773 SUPERFAMILY L domain-like 102 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1848 Dere-ChrDere02 18242261 18246353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1848 12 699 Miscellaneous Gene Families AT5G14210 57.986 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Dere02g1848 PK_Tyr_Ser-Thr 9e-21 CL0016