Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1847 ATGGTTTCAAGCTTGAAAGCAAAGAACAGGAGAAGTGTTAAAATTGATTACCTCATTCATATTGAGGAAATCAAGCCTTGGCCCCCATCAGAATCCCTCAGATCCCTCCGTTCTGTATTGATACAATGGGAGAATGGGGAACGCCGTTCAGGTTCTACCAGCCATGTTGTCCCCTCACTGAGTTCTGCAATAGATGAAGGAAAAATTGAATTTAATGAGTCATTTAGACTTTCTGTAACTTTGTTGAGGGATATGTCTGTCAGAGGTGGTCGTGCTGATCTTTTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCCCGAAGAGATAAGACTGTCAAAGGTCAGTTGTTGGGGACTGCCATCGTAGACTTGGCAGATTATGGTATACTTAAGGAGACCTTGAGCATTAGTGCTCCAATGAATTGCAAGAGGAACTACAAAAATACAGATCAGCCAATTTTATTCATAAAAATTCAGCCTGTCAAAAAGAGTCGCACCAGGTCCTTGTCAAGGGACAGCTTGCCAAAAGAGGTGTCAAAGGACGTTAATGGTGGTGACTCAGCAATGATGAATGGAGAATACGCTGAGGAAGCTGAGATAGCCTCTTTTTCTGATGATGATGTTTCCTCACATTCATCTGTGGCAGCAGTTGCTTCTGCTCCTGAGGCCAACGGTTGCATGCCACCTGAACTTGTAGACGATCGATCAACTCAAAACACTTGTAGGAATGACAGGGGGCATCTCTTAGCGTCAGAAACAAGGGATGAAAAATTAAATATGATGCCACAAGATGCCTACCAGAAGCTGGAGAGGAGTTCATCATGCACGTCATCATTGGATATATCATCTGATCTCGGTAGTCCGGAAGACTTTAAGATCAAAACTAGAAGTGGTTGTAAACATTCAGATGAGGAGATTCGTGAAATGGTTGTTAATCATAGAAATACTGTTATGGATGTTCAAACATATAGCAAGAATCCTTGCACTGTAAACTGTGATGTTTCTGCAGTCAATGATAAATTCAATTGGAAATATGAGGAAGGCAATAAATATTGTCTGAAGGATGAAGGAGGTGGTGAATTTTACAGTAGTTTTGTTGAGGACAAACATGGAACTGAAAATACTAGCTTGGATATAAACAACAGCATAGAAAATGAAAGATCAGCAGCACAAGGTGCCAAAGAGCATGTCTTAGTGAGTAGCAGTACATATCCTTTAGGCGGGGCCAATATGGACATGAAGGGAAATATCATGAAAAATGAAAGATTAAAGCATGTAAAGTCTGTGAGGTCATCAGCAGACTCAGCTAGGCTTGCCGCATCAGTTGGTAGTAATTATAATGTGGATGCAAAGGAAATTGGCATAGTTGGAGATGCACAAAACAGTGGAGGAAACATCAGATGCAGCAACAAAAAAGATGCAAAGATTTATCCAAAGGAAGCAAGAATGAACATTCTAGACAGCAAAGTTGAGCATTTAGAAAACAAGATAAAGAGACTTGAAGGAGAGTTAAGAGAAGCTGCTGCTATTGAGGCTTCTTTGTATTCTGTAGTTGCAGAGCATGGAAGCTCCGTGAGTAAGGTCCATGCCCCAGCTCGGCGCCTTTCTAGGCTGTACCTCCATGCTTGTAAAGAAAACCATCGAGCAAGAAGGGCTGGGGCAGCAAAAAATGCTGTTTCTGGGTTAGTACTTGTTGCAAAGGCATGTGGAAATGATGTCCCAAGGCTGACATTTTGGTTGTCTAATTCCATTGTTTTGAGAACAATCATATGCCAAACCACCAAAGACATGGTGCCATCAGTTTCTTCAGGATCTAGTGTAAAAAGGAAAATTGAGGGAGGAGGAAATGCCCAGATAACACAACCATTACGATGGAAGGGATCCTCGTCTGGGAAAAATGAAAATACAGGAGCAGAAAATGGAGGCTTTGGTGACTGGGATGAACCTCATGTATTCATATCAGCACTGGAAAAGGTAGAAGCTTGGATCTTCTCTCGCATAGTGGAATCTATCTGGTGGCAGACTCTGATTCCACATATGCAACTGGATGCAATAGTTGCTAAAAGTGATGTGGATTCTCCCTCATCGAAAAGCTGTAGAAGGATGTCTAGCTCATGTGATCAAGAACAGGGGAGCATTTCACTAGATATTTGGAAGAATGCTTTTAGAGAAACCTGGGATAGGCTCTGTCCCATTCGAGCTGGAGGGCATGAGTGTGGTTGTTTGCCTGTACTTTCTAAATTGATAATGGAGCAGTGCGTGACAAGATTAGATGTGGCTATGTTCAATGCCATTCTTCGCAAATCTGCTGATGAAATCCCCAGTGATCCTGTATCTGATCCTATTAGTGATCCCAGTGTTCTCCCTATTCCACCAGGGAAATCAAGCTTTGGAGCTGGTGCACAGCTAAAGACTGCGATTGGGAACTGGTCTAGATGGCTAACTGACTTGTTTGGTATGGATGACGATGACTCATTTGGAGATACGGATGACCCTGATAACAGTGATGAGAGACAAAATACATCCTTTAAGTCCTTCTATCTTCTTAACGCACTAAGTGACCTTCTGATGCTCCCCAAGGATATGCTGTTAAGTTCATCCATCAGGAAAGAGGTATGCCCGAAGTTCAGCACATCACTTATCAGGAGGATTCTAGACAATTTTGTCGCAGATGAATTTTGCCCTGATCCAATTCCCAATGTTGTGTTTGAAGCTCTGGACTCACAGGATGATCTCGAGTATGGTAAGGACTGTGTAAGAAACTTCCCATGCAATGCAGCTCCCATTGTCTACTTACCCCCGCCGGCAACTTCTATTGCAACTGTTATTGGGGACGTTGGAAGTGAATCTCAGTTGAGAAGAAGTAGGTCATCTGTTCTCAGGAAGGCTTACACCAGCGATGATGAGCTTGATGAACTTAATTGCCCATTATCTTCAATACTATTTGATGCTTCCATATCTTCGGCAGTTTCAGCAAAACCAAGCTGGAAAACGAAAGAAATTCGGAATGGATCTGCTGTCAGATATGAACTACTCAGGGACGTATGGATGAGCAGCGAATAG 3066 0.425 MVSSLKAKNRRSVKIDYLIHIEEIKPWPPSESLRSLRSVLIQWENGERRSGSTSHVVPSLSSAIDEGKIEFNESFRLSVTLLRDMSVRGGRADLFQKNCLEFNLYEPRRDKTVKGQLLGTAIVDLADYGILKETLSISAPMNCKRNYKNTDQPILFIKIQPVKKSRTRSLSRDSLPKEVSKDVNGGDSAMMNGEYAEEAEIASFSDDDVSSHSSVAAVASAPEANGCMPPELVDDRSTQNTCRNDRGHLLASETRDEKLNMMPQDAYQKLERSSSCTSSLDISSDLGSPEDFKIKTRSGCKHSDEEIREMVVNHRNTVMDVQTYSKNPCTVNCDVSAVNDKFNWKYEEGNKYCLKDEGGGEFYSSFVEDKHGTENTSLDINNSIENERSAAQGAKEHVLVSSSTYPLGGANMDMKGNIMKNERLKHVKSVRSSADSARLAASVGSNYNVDAKEIGIVGDAQNSGGNIRCSNKKDAKIYPKEARMNILDSKVEHLENKIKRLEGELREAAAIEASLYSVVAEHGSSVSKVHAPARRLSRLYLHACKENHRARRAGAAKNAVSGLVLVAKACGNDVPRLTFWLSNSIVLRTIICQTTKDMVPSVSSGSSVKRKIEGGGNAQITQPLRWKGSSSGKNENTGAENGGFGDWDEPHVFISALEKVEAWIFSRIVESIWWQTLIPHMQLDAIVAKSDVDSPSSKSCRRMSSSCDQEQGSISLDIWKNAFRETWDRLCPIRAGGHECGCLPVLSKLIMEQCVTRLDVAMFNAILRKSADEIPSDPVSDPISDPSVLPIPPGKSSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSFGDTDDPDNSDERQNTSFKSFYLLNALSDLLMLPKDMLLSSSIRKEVCPKFSTSLIRRILDNFVADEFCPDPIPNVVFEALDSQDDLEYGKDCVRNFPCNAAPIVYLPPPATSIATVIGDVGSESQLRRSRSSVLRKAYTSDDELDELNCPLSSILFDASISSAVSAKPSWKTKEIRNGSAVRYELLRDVWMSSE 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1847 1021 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 10 134 IPR019448 -
Dere02g1847 1021 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 479 1018 IPR021827 GO:0005643
Dere02g1847 1021 MobiDBLite consensus disorder prediction 619 643 - -
Dere02g1847 1021 MobiDBLite consensus disorder prediction 622 638 - -
Dere02g1847 1021 ProSiteProfiles C2 NT-type domain profile. 5 163 IPR019448 -
Dere02g1847 1021 Coils Coil 484 511 - -
Dere02g1847 1021 MobiDBLite consensus disorder prediction 167 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1847 Dere-ChrDere02 18232453 18238408 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g1959 01 33776526 33790924 Dere02g1847 02 18232453 18238408 CCT