Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1841 ATGGTGAGCAAAGCGATGCCGGAGGAGACCACGTCGATCGACTATGTCATGGAGGCTGCTTCCGGGGCTCACTTCTCCGGCCTCCGCCTTGACGGACTCCTCTCTTCTCCGCCTTCTTCCTCTTCTTCATCTCCTGCTCATCGATTTTCTTCCTCTGCAGTTTCTGCTTTGGATTCCTCGACCCTACCCTCTGATTCTGCTTCTACACGGCCCTTCGTTATCGGAGTTTCGGGAGGTACTGCTTCAGGGAAGACCACTGTGTGTGACATGATTATCCAACAGCTTCATGATCATCGCGTTGTGCTGGTCAATCAGGATTCGTTTTATCGTGGTTTGACGCCGGAAGAATCGGAGCGTGCGCACGAGTATAATTTTGATCATCCAGATGCTTTTGACACCGAGCAACTATTAGAATGCCTGCAAGAACTCATAAGCGGCCACTCAGTCCAAGTCCCAATATATGACTTCAAGAAGCACCAGCGCTCTTCAGATAGTTTTCGGCAGGTGAATGCTTCTGATGTCATTATATTGGAGGGAATTCTTGTGTTCCATGACCAACGTGTCCGTGACTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCCCGTAGAATTAGACGCGATACAGTGGAGAGGGGTAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTGAAGCCTGCATTTGATGATTTTGTTCTTCCATCAAAGAAGTATGCTGATGTGATCATTCCCCGAGGAGGTGATAATCATGTTGCCATTGATCTGATTGTGCAACATATCCACACGAAACTTGGTCAGCATGATCTATGCAAAATATATCCGAATGTGTATGTTATTCAGTCAACATTCCAGATAAGGGGGATGCATACGTTGATTCGTGACAAAGACATATCAAAGCATGACTTTGTATTTTATTCAGACCGACTTATACGTCTGGTTGTTGAGCATGGCTTAGGCCATTTGCCATTCACTGAAAAGCAAGTGGTTACTCCAACAGGATCTGTGTATACTGGTGTTGACTTCTGCAAAAAATTGTGTGGTGTTTCAATTGTTCGAAGTGGTGAGAGCATGGAGAATGCTCTACGAGCATGTTGCAAAGGCATAAAAATTGGAAAAATTCTGATTCACAGAGATGGAGACAATGGAAAGCAGCTTATATATGAGAAGCTTCCCAAGGATATATCAGAGCGGCATGTCTTGCTTCTTGACCCCGTCCTGGCTACTGGTAACTCTGCAAACCAAGCAATCGAGCTACTCATACAGAAAGGAGTTCCGGAATCCTACATAATATTCCTGAATCTCATCTCTGCACCGGAGGGAATCCATTGTGTGAGTAAAAGGTTTCCATCCTTGAAAATTGTCACATCCGAGATTGATGTTGCGTTAAATGAAGAGTTCCGCGTTATCCCAGGACTGGGCGAGTTTGGTGATCGCTACTTCGGAACTGACGATTAA 1479 0.451 MVSKAMPEETTSIDYVMEAASGAHFSGLRLDGLLSSPPSSSSSSPAHRFSSSAVSALDSSTLPSDSASTRPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEESERAHEYNFDHPDAFDTEQLLECLQELISGHSVQVPIYDFKKHQRSSDSFRQVNASDVIILEGILVFHDQRVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFVLPSKKYADVIIPRGGDNHVAIDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDKDISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIVRSGESMENALRACCKGIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLIQKGVPESYIIFLNLISAPEGIHCVSKRFPSLKIVTSEIDVALNEEFRVIPGLGEFGDRYFGTDD 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1841 492 Gene3D - 275 490 IPR029057 -
Dere02g1841 492 PRINTS Uridine kinase signature 217 228 - -
Dere02g1841 492 PRINTS Uridine kinase signature 71 88 - -
Dere02g1841 492 PRINTS Uridine kinase signature 101 112 - -
Dere02g1841 492 PRINTS Uridine kinase signature 203 213 - -
Dere02g1841 492 PRINTS Uridine kinase signature 146 161 - -
Dere02g1841 492 PRINTS Uridine kinase signature 239 252 - -
Dere02g1841 492 CDD PRTases_typeI 348 463 IPR000836 -
Dere02g1841 492 FunFam Uridine kinase 68 274 - -
Dere02g1841 492 SUPERFAMILY PRTase-like 274 491 IPR029057 -
Dere02g1841 492 CDD UMPK 73 271 IPR000764 -
Dere02g1841 492 Pfam Uracil phosphoribosyltransferase 289 490 - -
Dere02g1841 492 FunFam Uridine kinase 275 490 - -
Dere02g1841 492 Pfam Phosphoribulokinase / Uridine kinase family 73 259 IPR006083 GO:0005524|GO:0016301
Dere02g1841 492 PANTHER URIDINE KINASE 63 401 - -
Dere02g1841 492 NCBIfam uridine kinase 71 271 IPR000764 -
Dere02g1841 492 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 264 IPR027417 -
Dere02g1841 492 Gene3D - 67 274 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1841 Dere-ChrDere02 18180054 18185533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1841 6 492 PRT Gene Family AT3G27190 86.066 0.0 844