LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g1831	ATGGCAGAAGCAAATCTCATTAACCCTGCAGCGTTCTCGAGCGCATCCTGCTATATTTTAGAAGCAAGTAATCCCAATAAAATATGGAAAACGAATGCTATCCTCGAAAACCATTCCCCATATTTGCCTATTCAAGTCGCCGTCAACATATTCACTTCTAATCTTCTCCATTACATCCTCAGACCTCTCCATCAGCCTCGTCTCGTTGCTGAGATTCTTACTGGTTTCGTTTTAGGTCCTCTTTGTTTGGGAAATACCCCATTAGGGAAGGCGCTTTTGCCTACAGCAGGAATCCTCAATATCGAAACCTTCGGAAATCTGGGGCTCATGTGCTACGTCTTTCTCAGTGGTTTAGAAATGAACTTAGATTCCATCCTAAAAGTACGAAAGATGGCTACAAGCATTGCCATTGCTGGGATTATCATTCCAATGGTGATTGGAATGGGCTTTTATGCTGTGATACAAAACGTTTATGAAAAACCTGCAGAATTGCAATTCCAGGAAGATGACAGATACACCGCTAAAGCCTATTTATTTTGGGGTTTAGCTCTAATGGTCACAGGTTTTCCAGTCCTTGCTCGAATCCTTACTGATCTCAAGCTCCTCTATACCAAGTTAGGCAAAGCCGCTTTAGTTGCAGCTATGCTTACCGACATCTATGGTTGGGTTCTGTTTGTAATATTAATTCCATTTGCCAGTAGCAATGGAATTGCAATCTTTTCGGTGCTGAGTACCGTACTTTTCATCCTTGTCTGCATCTTCGTGTTACGTCCTCTAATTACCCGATTCATTGATCGCAAAACCGACGTGGATACGTGGGGCGATTCTCAGGTGATCTGTGTGCTGATGGGCGCTTTCATTTGTTCCTATATTACAGATGCACTGGGCACACACTCTATCGTTGGAGCATTTGTGTATGGGCTTATCTTACCTAATGGGAAACTTGCTGATTTGGTGATCGGAAGGTTAGAAGAATTCGTCACTACGGTTATATCACCAATCTTCTTCTTCCGTTCTGGCTTTACAGTTGACTTGGTGATGCTTGCAAAACAGAAATATTGGCCCTTGATGGCCCTGGTTGTCGTCTTGCTTTCAGTCCCGAAAGTCTTAAGTACTCTGATAGCTACCTTTCTCTTTGGTATACCCTCTCGTGATGGTATGGGTATTGGACTGCTTCTCAACACCAAAGGCGTCTTGGCACTAATTATACTAAACGTAGCCTGGGATAGACAGATTTTGTCTGTAGTATCCTTCTCAATTATGATGTGTGCAATTTTCCTAATGACTTTCGCCGCGCCTATTCTCATTAATGCCATATACAAGCCAAGAAAGCGATTTGAGATGTACAAGTTAAGGACAGTCCAAAAGCTACGGCTTGATGCGGAGCTTCGAATTCTTGCTTGCGTCCATAATATTCGCCAAGCTGTGAGCATGGTCAGCCTCATAGAAGCTTGCAATGCTACCAGAATTTCGCCTTTACATGTGTTTGGAGTTCACATGGTTGAGTTCATCAGACGCACCACCGCCTTTTTCGCTGCCCATATAGAGAATGCTGCAGCATCAAATGTCACCCAATCACAGAAAGAGTTTGAGAGCATAACCAATTCCTTCAACATGCTGACAGAGTTGAACAATGCTGTTAGAGTTGACACCATCAGTGCTCTGTCACCCTATGAAAGCATTCATGAGGACATATACAGTTTAGCAGAGCAGAAACGAACGACTCTAATTCTCCTTCCTTTCCACAAACAACCAGATGTAGAAGGTGGTCTAGAGATAGCTAATGCAGAATACAAAGACATAAACCAGAATGTTCTGCTGAATGCACCTTGTTCCACGGGAATCTTCGTTGATCGTGGTATTTCCTTGTCTAGAACCAACTTGCGCATTCTGATGCTCTTCGTTGGAGGCCCTGATGATCGTGAAGCCTTAGCTGTTGCTTGGAGAATGGTGGGGTATCGAGGGAACCAGCTTTCCATGGTTCGGATTCTTCTATGTGGCGAAGCTGCAGAAGTGGATGTCTCGGTCCATGATGAAGCTCAACTACTATCTTCTGTGGTAATGGACGATGAGAGGCAAAGGTTGTTGGATAACGAGTACGTGGATTTATTTAGACACAAGGTAGTTTATAACAATGATACCATAACATACTCAGAGTGGGAAGTGTACAGTAGCGAGGACCTAACTTCAGTGCTCCATGATTTTGGGAAAGATGGGTACGACTTGTTCATCGTAGGACAAGGAAATGGCAGGAACTCATTAGTATTTTCGAATTTTATGGAATGGAGTGACAATCCAGAGCTTGGAGTTATAGGGGATATAGTGGCCTCAAATGATTTTGGTTCGCGCTCATCGTTGCTTGTTGTGCAGCAATATGGGTCAGGGACAACAGGGTACGGGACTCAAACTGGACATCCTAGGCAAACGCCGGCGAAAAGCGATGGCTCTGAGACGCTTGTTGTGACTTCTTTTTAA	2475	0.438	MAEANLINPAAFSSASCYILEASNPNKIWKTNAILENHSPYLPIQVAVNIFTSNLLHYILRPLHQPRLVAEILTGFVLGPLCLGNTPLGKALLPTAGILNIETFGNLGLMCYVFLSGLEMNLDSILKVRKMATSIAIAGIIIPMVIGMGFYAVIQNVYEKPAELQFQEDDRYTAKAYLFWGLALMVTGFPVLARILTDLKLLYTKLGKAALVAAMLTDIYGWVLFVILIPFASSNGIAIFSVLSTVLFILVCIFVLRPLITRFIDRKTDVDTWGDSQVICVLMGAFICSYITDALGTHSIVGAFVYGLILPNGKLADLVIGRLEEFVTTVISPIFFFRSGFTVDLVMLAKQKYWPLMALVVVLLSVPKVLSTLIATFLFGIPSRDGMGIGLLLNTKGVLALIILNVAWDRQILSVVSFSIMMCAIFLMTFAAPILINAIYKPRKRFEMYKLRTVQKLRLDAELRILACVHNIRQAVSMVSLIEACNATRISPLHVFGVHMVEFIRRTTAFFAAHIENAAASNVTQSQKEFESITNSFNMLTELNNAVRVDTISALSPYESIHEDIYSLAEQKRTTLILLPFHKQPDVEGGLEIANAEYKDINQNVLLNAPCSTGIFVDRGISLSRTNLRILMLFVGGPDDREALAVAWRMVGYRGNQLSMVRILLCGEAAEVDVSVHDEAQLLSSVVMDDERQRLLDNEYVDLFRHKVVYNNDTITYSEWEVYSSEDLTSVLHDFGKDGYDLFIVGQGNGRNSLVFSNFMEWSDNPELGVIGDIVASNDFGSRSSLLVVQQYGSGTTGYGTQTGHPRQTPAKSDGSETLVVTSF	824

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g1831	824	PANTHER	CATION/H + ANTIPORTER	32	793	-	-
	Dere02g1831	824	Pfam	Sodium/hydrogen exchanger family	50	438	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Dere02g1831	824	Gene3D	-	42	448	IPR038770	-
	Dere02g1831	824	MobiDBLite	consensus disorder prediction	797	824	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g1831	Dere-ChrDere02	18064996	18067654	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g1831	8	792	Antiporter Super Family	AT2G13620	37.060	0.0	544