Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1811 ATGGATCCCAAGGGCTCAAAGAAGCCACAAGAGGCATCCAACAAGTTCTTGAGTCTCCCCCAGCCACAATCCAATATGGGAGAGAACAACAAAGCAGCAGCTGAAGTGAAGGATTTCCAGATTTCGATTGCGGAGAAAGAAGAAAACAGCAAGAATAAGCAGTTAGCCCCAAAGAGGTCTTCAAACAAAGATAGGCACACCAAGGTGGAAGGTAGAGGAAGAAGAATAAGGATGCCGGCTTTATGTGCAGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGAGAAACCATACAGTGGCTTCTGCAGCAGGCGGAGCCGTCGATAATCGCAGCCACAGGAACTGGGACGATACCCGCATCAGCTTTAGCTGCAGCTGGAGGCTCTGTTTCACAAGAGGGGACCTCTCTATCTGCTGGATTGCACCAAAAAATGGATGAATTAGGGGGGTCCAATATAGGGTCAGGGAGTAGGACCAGCTGGGCAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCTTCTGTCAGTGGATTTGGATTTCAGTCATCATCTTCTGGTCCATCCGCAACAAATTTAGGGAGTGAGAGTTCAAATTACCTGCAAAAGATTGGGTTCCCTGGGTTTGACTTGCCTGCGGCAGCCACCAACATGGGTCCTATGAGCTTCACCTCAATTTTGGGTGGGAGTAGTAACCAGCAGATTCCTGGTTTGGAGCTGGGGTTGTCTCAAGACGGTCACATAGGGATTTTGAACCCACAAGCCTTGAGCCAGATTTACCAGCAGATGGGTCAAGCGAGAGTACAGCTACAACAGCAGCATCAACATCAACATCATCAACAGCAGCAGCAGCAACCTCCTGCCAAGGATGATTCTCAAGGTTCTGCAGGGCAGTAG 924 0.4946 MDPKGSKKPQEASNKFLSLPQPQSNMGENNKAAAEVKDFQISIAEKEENSKNKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQEGTSLSAGLHQKMDELGGSNIGSGSRTSWAMVGGNLGRPHVATGLWPSVSGFGFQSSSSGPSATNLGSESSNYLQKIGFPGFDLPAAATNMGPMSFTSILGGSSNQQIPGLELGLSQDGHIGILNPQALSQIYQQMGQARVQLQQQHQHQHHQQQQQQPPAKDDSQGSAGQ 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1811 307 MobiDBLite consensus disorder prediction 40 74 - -
Dere02g1811 307 MobiDBLite consensus disorder prediction 1 74 - -
Dere02g1811 307 MobiDBLite consensus disorder prediction 276 307 - -
Dere02g1811 307 MobiDBLite consensus disorder prediction 11 30 - -
Dere02g1811 307 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 294 IPR005333 GO:0003700
Dere02g1811 307 Coils Coil 29 49 - -
Dere02g1811 307 Pfam TCP family transcription factor 61 168 IPR017887 -
Dere02g1811 307 ProSiteProfiles TCP domain profile. 62 116 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1811 Dere-ChrDere02 17917425 17918348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1811 28 304 TCP Transcription Factor Family AT3G27010 60.976 2.90e-89 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere02g1811 TCP 9.9e-30 No_clan