Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1805 ATGGAGAAGAGCAATGGAAATTGTTTCCAACTTGAAGTGAGGATTGGAGAGCCAACTCGAGTTCCGCCTGCAGAGGAAACAGAGAAAGGCACATATTTCCTGTCTAATCTTGACCAGAACATTGCAGTGATTGTCCGAACTGTTTATTGCTTCAAAATGGCAGAGAAAGGAAATGAAAAGGCAGGGGAAGTTTTAAAGAATGCGTTGAGGAAGGCTCTAGTGCACTATTACCCACTTGCTGGAAGGCTGAACATCAGCTCTGAGGGTAAACTCATGGTGGAGTGCACAGGGGAGGGTGCTCTGTTTGTGGAGGCTGAAGCTAACTGTTCAATGGAAGAGATTGGTGACATTACGGAGCCAGATCCTCGTACTCTTGGCAAGCTTGTTTATGACATTCCTGGTGCAAAACACATACTTCAGATGCCTCCTTTGGTTGCCCAGGTGACTAAGTTTAATTGTGGAGGATTCGCTCTTGGGCTGTGCATGAATCACTGTATGTTCGATGGAATTGGTGCTATGGAGTTTGTGAACTCTTGGGGTGAAGTAGCCAGGGCCCTACCGCTCTCTGTCCCACCATTTGTGGACAGAAGCATACTCAAGGCACGTGACCCACCTCAGATACAGTTTCAACACCAAGAATTTGCAGACATTGAAGACAAGTCTAGCACCAATGCCTTGTATAATGAAGACATGATGTACAGCTCCTTCTGTTTTGATCTTGAGAAGCTGAAGCTACTGAAGATTATGGCTATGAAAGATGGGGTTCTTGAATCTTGCACAACTTTTGAAGTCCTCTCAGCATACGTTTGGATAGCTAGAACCAAAGCCCTAAAAATGCTGCCAGAGCAGAAGACAAAGCTCCTTTTTGCTGTGGATGGAAGGCCTAAGTTTAACCCTCCTCTACCAAAAGGGTACTTTGGAAATGGGATTGTATTAACAAATTGTGTGTGTGAAGCAAAAGAACTATCAGAGAAGCCCCTCTCATTCGCTGTGACGCTAATTCAAAATGCAATCAAGATGGTCACAGACAGCTACATGAGATCAGCTATAGATTATTTTGAAGTGACAAGAGCTAGGCCATCTCTGGCTTATACACTTCTGATCACAACTTGGTCTAGGCTCTCCTTCCATACCACTGATTTTGGTTGGGGAGGGCCTGCACTTTCAGGGCCAGTTTCATTGCCAGAGAAGGAAGTGATTTTGTTCCTATCTCACGGGAAAGAAAGGAAAAACATCAATGTGCTTCTGGGTTTACCAGCTACTGCCATGAAGGTTTTCCAAGAGTTGATGCAGATATAA 1299 0.4465 MEKSNGNCFQLEVRIGEPTRVPPAEETEKGTYFLSNLDQNIAVIVRTVYCFKMAEKGNEKAGEVLKNALRKALVHYYPLAGRLNISSEGKLMVECTGEGALFVEAEANCSMEEIGDITEPDPRTLGKLVYDIPGAKHILQMPPLVAQVTKFNCGGFALGLCMNHCMFDGIGAMEFVNSWGEVARALPLSVPPFVDRSILKARDPPQIQFQHQEFADIEDKSSTNALYNEDMMYSSFCFDLEKLKLLKIMAMKDGVLESCTTFEVLSAYVWIARTKALKMLPEQKTKLLFAVDGRPKFNPPLPKGYFGNGIVLTNCVCEAKELSEKPLSFAVTLIQNAIKMVTDSYMRSAIDYFEVTRARPSLAYTLLITTWSRLSFHTTDFGWGGPALSGPVSLPEKEVILFLSHGKERKNINVLLGLPATAMKVFQELMQI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1805 432 Pfam Transferase family 12 430 - -
Dere02g1805 432 Gene3D - 214 431 IPR023213 -
Dere02g1805 432 FunFam Tryptamine hydroxycinnamoyl transferase 218 431 - -
Dere02g1805 432 Gene3D - 7 213 IPR023213 -
Dere02g1805 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 429 - -
Dere02g1805 432 FunFam Spermidine hydroxycinnamoyl transferase 11 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1805 Dere-ChrDere02 17872738 17874804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1805 11 430 Monolignol Biosynthesis Gene Families AT5G48930 34.713 1.51e-83 261