Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1800 ATGGAGAAGAATCTTGCGGAAAAATCCGGCAGTTTCGCTCGCAGAGACGAGCAGAACAATGCCGGCGAGAGTGGGACACCGCGTGTGCCGTTGCCAGATACCGAAGAGACCGATGCTGAAGAGATTGATGCCAAAACGAAGGATGATGCCAAGCCAGCTGCGGATACAGAGGTAATACCCGATGAGGAGAAGAAAGAAGATGCTCCAGTGGAGGTTCCGGAATCTCCCCCTCCGAGCCTCGAGAAGATTTCAGGAGATGTCGATCAATATCTTGAGACACTAAACAAGGATGAAAATGTCGAAGAAGCTTCTTTAGAGATCCCTGATTTCATTGACAAGTTCTTGGAACTCGTCGAAGAGAAGATCGCCTTATACGACTCAGGCCAAGGTAAAGGCAAATGGGGTGAGGCTGCAGAGGAAGATTCGTCATTGCTGGAAACTGTGGGTCGGATTTCTAAGTTAATGAAATTGTTGAGTCAGTGGCAATCTTCCTCAGAAGAGATCAATAAACGAAAGGATTCGTTGGTCAACCATATTGGTATCCTTCATCATCGACTGATGTCGTATTTCGAAGAAGAGTTCCGATTCCTTTTGGAAGAATCTCACAAGCCTGGCGAATCTGACCCCGGTGGCAATGACTCGAAAGGGAAGCAAGTAGAACAAGATTCTTGCCAATTGCCAGATTCAGAAGCCACCGGGTCGGACGATGAGTTTCAGATTTATACCGAGGAGACCATTACCAAATTGAAACAGATAGCGAAAGAGATGATATCATGTGGTTACCAATCCGAGTGCTGCCAGATTTATACGATTTCCAGGAGGTACGCATTCGAAGAGAACTTGCTCAATATAGGATTCGAGAAAATGAGCATCGACGAGGTTCAGAAAATGCAATGGAAAACATTAGAGAGAGACATCCCCACGTGGATCAAAACCTTCAAGGAATGCGCCTCCATCTACTTATCCGACGAACGGAAGCTGGCAGAGACGGTGTTCGCAGAAAATCAGCAGTTAGCAACTAGCCTCTTGAGCAATATCACTCGTGGCGTCTTCATACAGCTTATAAATTTTGCGGAAGGCGTGGCCATGACGAAGCGCGCCGCGGAGAAGCTTTTCAAAATCCTCGACATGTACGAGACCTTGCGAGATATAATCCCCAATTTTGACGATCTGTTACCGGAAGATTGTGCGAACGAGCTCAAGACCGAAACGACGACAGCGAAAAGCAGACTTGGCGAGACCGCGATTAGCATATTCGGTGATCTAGAAAATGCGATCAAGACAGACGCCGAAAAAACTCTGGTTCCCGGCGGTGCGGTTCATCCGTTGACTCGTTACATCATGAACTACCTCCCATTCGCGTGCGAGTACATGGAGACGTTAGAGCAAGTGTTCAAGGAACACTCGAAGATTGAACGCGCCGACTCCACCAGCAGGCCCCACTACGAGGGAGAAGGGAATTCTCAACATAAAAATAACGCTAATAATAACGGCAAGGAGCAATCGCCGTTCTCGGCTCAGCTGATTAGGTTGATGTCTTTGCTGGATACCAATCTGGAAGGCAAGTCGAAGATGTACAGGGACGTGGCGTTGAGCTGCATCTTCATGATGAACAACGGTAGGTACATACTGCAGAAGATCAAAGGGGCACGAGAGATCTACAACTTGATGGGTGAGACGTGGTGTAGGAAGAGGTCGTCGGATCTGAGGACGTACCACAAGAATTACCAAAGAGAAACATGGAGTAAGATTCTTAATTGCCTGAGCCCCGAGGGGTTGAGTGTGAACGGGAAGGTGCAGAAGCCCGTTCTCAAAGAGAGGTTCAAAGGCTTCAACGCGATGTTCGATGATATACACAAGACGCAGAGCACGTGGATTGTGAACGACGAGCAGCTTCAGTCTGAGCTGAGGGTATCGATAACGGCGGTGGTGATTCCGGCGTACAGGGCATTCTTGGGGAGGTTTTCTCAGTATTTGGACCCAGGAAGGCAAACAGAGAAGTATATAAAGTACCAGGCTGATGATATAGAAACTTTCATCGACGAGCTTTTTGATGGGAACGCTCAGTCTAATGCGGCTAGAAGGAGATCATGA 2094 0.479 MEKNLAEKSGSFARRDEQNNAGESGTPRVPLPDTEETDAEEIDAKTKDDAKPAADTEVIPDEEKKEDAPVEVPESPPPSLEKISGDVDQYLETLNKDENVEEASLEIPDFIDKFLELVEEKIALYDSGQGKGKWGEAAEEDSSLLETVGRISKLMKLLSQWQSSSEEINKRKDSLVNHIGILHHRLMSYFEEEFRFLLEESHKPGESDPGGNDSKGKQVEQDSCQLPDSEATGSDDEFQIYTEETITKLKQIAKEMISCGYQSECCQIYTISRRYAFEENLLNIGFEKMSIDEVQKMQWKTLERDIPTWIKTFKECASIYLSDERKLAETVFAENQQLATSLLSNITRGVFIQLINFAEGVAMTKRAAEKLFKILDMYETLRDIIPNFDDLLPEDCANELKTETTTAKSRLGETAISIFGDLENAIKTDAEKTLVPGGAVHPLTRYIMNYLPFACEYMETLEQVFKEHSKIERADSTSRPHYEGEGNSQHKNNANNNGKEQSPFSAQLIRLMSLLDTNLEGKSKMYRDVALSCIFMMNNGRYILQKIKGAREIYNLMGETWCRKRSSDLRTYHKNYQRETWSKILNCLSPEGLSVNGKVQKPVLKERFKGFNAMFDDIHKTQSTWIVNDEQLQSELRVSITAVVIPAYRAFLGRFSQYLDPGRQTEKYIKYQADDIETFIDELFDGNAQSNAARRRS 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1800 697 MobiDBLite consensus disorder prediction 472 501 - -
Dere02g1800 697 MobiDBLite consensus disorder prediction 1 84 - -
Dere02g1800 697 SUPERFAMILY Cullin repeat-like 139 685 IPR016159 -
Dere02g1800 697 Gene3D Exocyst complex component Exo70 133 694 - -
Dere02g1800 697 MobiDBLite consensus disorder prediction 487 501 - -
Dere02g1800 697 MobiDBLite consensus disorder prediction 201 215 - -
Dere02g1800 697 MobiDBLite consensus disorder prediction 472 486 - -
Dere02g1800 697 Pfam Exo70 exocyst complex subunit 309 682 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dere02g1800 697 MobiDBLite consensus disorder prediction 40 71 - -
Dere02g1800 697 FunFam Exocyst subunit Exo70 family protein 128 692 - -
Dere02g1800 697 MobiDBLite consensus disorder prediction 201 233 - -
Dere02g1800 697 PANTHER EXOCYST COMPLEX PROTEIN EXO70 115 686 IPR004140 GO:0000145|GO:0006887
Dere02g1800 697 MobiDBLite consensus disorder prediction 216 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1800 Dere-ChrDere02 17823679 17825772 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1800 79 697 EXO70 exocyst subunit family AT5G13990 53.096 0.0 649