Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1796 ATGGAGACGCTTCCGAGCTTTGTTGTCAATGGAGGCATCAAGCTGCCTATTGGGTACAGATTCTGTCCCACCGATGAAGAGCTTGTCATTCACTACCTCAGGAAGAAGGCCTTCGCTCAACCCTTACCCGCATCAGTGATTCCTGAGCTCGATGTGTTTCAGAACCATCCTTGGGGGCTCCCAGGTGTAGGCGTAGAAGATTCAAAAGAAAAGGGGTATTTTTTCGGCAATCGAAAAAATTATCTCAGTGGAAATGTTAGCAAGATAGCTGCTGGTTCTGGGTACTGGAAACCCACAGGCAAGGACAAACAAATTGTGGCTTCTCAGACCAACCAAGTGGTCGGGACGAGGAAAACACTGGTTTTCTGTGAAGGCAAACGTTCCTGCGAGACCAAAACTCGGTGGGTCATGCACGAGTTGCGCCTTGAAGCCTCTGGAGCTGCTTCTCACGCTTCTCAGATGCCATGGGCAGATTGGGCTGTGTATCGCATATTTCAGAAGAAGAAGAATCTCAAGAGAAAAGGTTCTGATAGGCAGCTTTCAAATATCAGAAAAGTTCAGAAGCTTGAAGGAATTCAACCCAGTTTCATAGATTTCACTGTGGATTGTGGCTCCAATGAAGGTCCTCCCCCACCTAGTTCCCCCAGTTTCAGCGAAGGCAGTGACATCATCGCCTCTAACAAATTAGCTTAG 693 0.4776 METLPSFVVNGGIKLPIGYRFCPTDEELVIHYLRKKAFAQPLPASVIPELDVFQNHPWGLPGVGVEDSKEKGYFFGNRKNYLSGNVSKIAAGSGYWKPTGKDKQIVASQTNQVVGTRKTLVFCEGKRSCETKTRWVMHELRLEASGAASHASQMPWADWAVYRIFQKKKNLKRKGSDRQLSNIRKVQKLEGIQPSFIDFTVDCGSNEGPPPPSSPSFSEGSDIIASNKLA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1796 230 PANTHER NAC TRANSCRIPTION FACTOR 56 15 178 - -
Dere02g1796 230 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Dere02g1796 230 Gene3D NAC domain 24 173 IPR036093 GO:0003677|GO:0006355
Dere02g1796 230 MobiDBLite consensus disorder prediction 201 230 - -
Dere02g1796 230 ProSiteProfiles NAC domain profile. 15 167 IPR003441 GO:0003677|GO:0006355
Dere02g1796 230 SUPERFAMILY NAC domain 11 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1796 Dere-ChrDere02 17789455 17790447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1796 7 169 NAC Transcription Factor Family AT5G13180 49.390 9.22e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g1796 NAM 5.1e-29 No_clan