Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1791 ATGGCATCAGAGCCAGCCATGTATGATTTCATGAGCCTCCCCTCTGCTCCTTCTTCTTCATCTTCAGCAAACTCGCATGCGCCTCCGTCTCCTCCTACCTCTCCTCCTCGTCGCCTTTTTCCCTGCATTTACTGTCACCGCATGTTCTTCTCCTCCCAAGCGCTGGGCGGCCACCAGAATGCCCACAAGCAAGAGCGAGCCGCTGCTCGCAGAACCAGCAATGGCGTTCCTCCCCAACCTCCTCTGCCACACAAGACCACCCACCAGTCTCTGCCCGTCTTGATTCCCAAAACCGAAGCCGCTCATCACTTCTTGGTGGACCAGTGTTGTTGGATGGAACAGAATATGGATGCCATGCACGCCCCTCGCCTTTCTGCAAATCCTGTTCCTTTTCCTTCTCACCGCGGCTCCGTCCCTGAACTTCTCTGCCCTAAACCTAAGGGGCCTGACCACGTAAAGCTCGACCTGACTCTCCACTTGTGA 483 0.559 MASEPAMYDFMSLPSAPSSSSSANSHAPPSPPTSPPRRLFPCIYCHRMFFSSQALGGHQNAHKQERAAARRTSNGVPPQPPLPHKTTHQSLPVLIPKTEAAHHFLVDQCCWMEQNMDAMHAPRLSANPVPFPSHRGSVPELLCPKPKGPDHVKLDLTLHL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1791 160 MobiDBLite consensus disorder prediction 13 27 - -
Dere02g1791 160 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Dere02g1791 160 MobiDBLite consensus disorder prediction 56 87 - -
Dere02g1791 160 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
Dere02g1791 160 PANTHER ZINC FINGER PROTEIN JAGGED 15 140 IPR045320 GO:0003700
Dere02g1791 160 MobiDBLite consensus disorder prediction 1 35 - -
Dere02g1791 160 SUPERFAMILY beta-beta-alpha zinc fingers 37 67 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1791 Dere-ChrDere02 17748192 17748674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1791 38 82 C2H2 Transcription Factor Family AT5G14010 66.667 1.33e-14 65.5