Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1778 ATGTGGTACGGACCAAGACTGTTGAGTGGTGAGTGCAAGTTTCTTCATTTTGGTACTGAAGAAACTTCTCAAGGACATGGTATGCCAAAAAAAGTGGGTTTTAATATTTTCCGACTGCTTGAGCACCTCCCTCTTTATTCCGCGAGTGTGATCGGAGTCCAACCTGTAGGTCCAATGGCGACCAGGTACTGGATAGTCTCTCTTCCCGGCCAGAATTCCGCATCTGCTATCGGGAATCAATTGCAGGAAGAAATCTCCAGGCATTCCTTTGATACTCCTCTTTATAGATTCAATATTCCTAATCTCCGTGTTGGAACCCTAGACTCTCTTCTCTCTCTCAGCGATGATCTCGTGAAGTCCAACAGTTTCATGGAAGGCGTGTCACACAAGATCAGGCGACAGATTGAGGAATTGGAGAGAGTGTCAGGCGTAGTAAGCAGCGGACTGACTGTAGATGGAGTGCCTGTTGATTCATACTTGACCAGGTTTGTTTGGGATGAAGCAAAGTACCCGACTATGTCACCTTTGAAGGAGATTGTGGATGGTATTCATGGTCAAGTGGCAAAGATTGAGGATGATCTGAAGGTTCGTGTTTCTGAATATAACAATATACGCAGCCAGCTTAACGCTATTAACCGAAAGCAGAGTGGAAGCTTAGCTGTTCGTGATCTTTCCAACCTGTTAAAGCCAGAGAATATTGTAACTTCAGAACATTTAACTACCCTCCTTGCAATTGTTCCCAAGTATTCGCAGAAGGATTGGCTCTCAAGCTATGAAACATTGACAAACTATGTGGTCCCCAGGTCTTCCAAGAAGTTGTATGAGGATAATGAATATGCTCTTTACACTGTAACACTCTTCAGTCGTGTTGCAGATAATTTTAGAACAAGTGCACGTGAAAAAGGATTTCAGATTCGTGATTTTGAATACAGTCCAGGAACACACGAGAGTCGAAAGCAGGAGCTAGAGAAATTGATGCAAGATCAGGAAAGTTTAAGAGGTTCCCTGTTGCAGTGGTGTTATACAAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTAGCGCTGTACGAGTATTTACTGAGAGCATTCTGAGATATGGTCTGCCACCATCTTTCCTGGCATGTGTTTTAGCTCCATCTACAAAAAGTGAGAAGAAAGTACGTTCTATCCTTGAAAAATTGAGTGACAGCGCAAACAGTGCATACTGGAAGAGTGAGGAAGAAGGAGGAGGAATGGCTGGTCTAGCGGGCGAGGCTGATGCCCACCCTTATGTCTCCTTCACTATCAATCTTGTTTGA 1302 0.4401 MWYGPRLLSGECKFLHFGTEETSQGHGMPKKVGFNIFRLLEHLPLYSASVIGVQPVGPMATRYWIVSLPGQNSASAIGNQLQEEISRHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKSNSFMEGVSHKIRRQIEELERVSGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVSEYNNIRSQLNAINRKQSGSLAVRDLSNLLKPENIVTSEHLTTLLAIVPKYSQKDWLSSYETLTNYVVPRSSKKLYEDNEYALYTVTLFSRVADNFRTSAREKGFQIRDFEYSPGTHESRKQELEKLMQDQESLRGSLLQWCYTSYGEVFSSWMHFSAVRVFTESILRYGLPPSFLACVLAPSTKSEKKVRSILEKLSDSANSAYWKSEEEGGGMAGLAGEADAHPYVSFTINLV 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1778 433 Pfam V-ATPase subunit C 63 426 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dere02g1778 433 FunFam V-type proton ATPase subunit C 221 309 - -
Dere02g1778 433 CDD V-ATPase_C 63 430 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dere02g1778 433 Gene3D - 99 370 - -
Dere02g1778 433 Gene3D Vacuolar atp synthase subunit c; domain 1 63 393 - -
Dere02g1778 433 SUPERFAMILY Vacuolar ATP synthase subunit C 58 432 IPR036132 GO:0015078|GO:0033180|GO:1902600
Dere02g1778 433 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 60 432 IPR004907 GO:0033180|GO:0046961|GO:1902600
Dere02g1778 433 Gene3D - 221 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1778 Dere-ChrDere02 17632519 17638640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1778 59 432 Primary Pumps ATPases(2) AT1G12840 81.551 0.0 652