Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1777 ATGGATCCTTCAGATAGCAAATGCGGCCGAGCTCTGCTGCCGTTTTTCCTCTACTCTATATCTTCGTCTCAGAAAACTCTGCCTCTGCAGAAGATGCTCAACTCTACCCACCTCCGTCTCTCTTCTTCTCCTTCGGCTCTCGAAGGAGGTTCTTCGAGCAAGAGCTACATGATTCCGGCTCCGAGTGAGCCTGGCAAGATCGAGTTGTACTCTCCAACCTACTATGGTGCTTGTACTGTTGGTGGAATCCTCAGCTGTGGACTCACTCACATGGCGGTCACTCCTCTTGACTTAGTCAAATGTAATATGCAGATTGACCCTACGAAGTACACGAGTATTTCATCTGGATTTGGAGTTTTGCTTAAGGAGCAGGGACTTAGGGGCTTTTTCAGGGGCTGGGTTCCAACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAATTTGGATTCTATGAGTTCTTTAAAAAATACTACTCTGATATTGTTGGCCCAGAGTATGCGACCAAATACAAGACCCTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCAGATGTTGCACTCTGCCCCTTCGAGGCTGTAAAGGTTCGAGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTTGCAGATGGGCTCCCAAAATTTGTCAAATCTGAGGGAACTTTAGGGCTGTACAAAGGCATACTTCCTCTTTGGGGACGTCAGATTCCATATACTATGATGAAGTTTGCTTCTTTTGAAACTGTCGTTGAGATTATCTATAAACACGCCATATCCAAACCAAAGAATGAGTGCAGCAAAAATCTGCAACTTGGTGTGAGTTTTGCTGGTGGATATATAGCTGGTGTGTTGTGTGCAGTTGTTTCCCATCCTGCTGATAACCTTGTCTCCTTCTTGAACAATGCCAAAGGGGCCACAGTCGGTGATGCTGTGAAGAAGCTTGGTTGGTTAGGTCTCTTTACCCGTGGTCTCCCCCTCCGTATTGTTATGATCGGAACTCTCACTGGAGCACAATGGGGAATATACGATGCATTTAAAGTCTTCGTGGGGCTGCCAACCACCGGTGGTGTTGCTCCTGTTTCTGTTCCTAGTCCTGCTCCTCCTACCGAGCTTGCACAGGCGGAGAGTTCTTAG 1140 0.4746 MDPSDSKCGRALLPFFLYSISSSQKTLPLQKMLNSTHLRLSSSPSALEGGSSSKSYMIPAPSEPGKIELYSPTYYGACTVGGILSCGLTHMAVTPLDLVKCNMQIDPTKYTSISSGFGVLLKEQGLRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIVGPEYATKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGILPLWGRQIPYTMMKFASFETVVEIIYKHAISKPKNECSKNLQLGVSFAGGYIAGVLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGWLGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPVSVPSPAPPTELAQAESS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1777 379 Pfam Mitochondrial carrier protein 77 159 IPR018108 -
Dere02g1777 379 Pfam Mitochondrial carrier protein 173 258 IPR018108 -
Dere02g1777 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Dere02g1777 379 SUPERFAMILY Mitochondrial carrier 75 346 IPR023395 -
Dere02g1777 379 Gene3D Mitochondrial carrier domain 51 165 IPR023395 -
Dere02g1777 379 Gene3D Mitochondrial carrier domain 166 352 IPR023395 -
Dere02g1777 379 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 46 361 IPR044677 GO:0005315|GO:1990547
Dere02g1777 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Dere02g1777 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Dere02g1777 379 FunFam Phosphate carrier protein, mitochondrial 73 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1777 Dere-ChrDere02 17625843 17629472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1777 10 361 Chloroplast and Mitochondria Gene Families AT5G14040 76.164 0.0 562