Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1770 ATGGACAGGGATATGCTACAAAGAGCTCACGGTGTCCCTTGGATGGAAGAAGTTGAAGACGCAGCATCTTGGACGAGAACTAACAACGAAGGTGAGTCCAAGGATGAGGACATTGCTTTGGGAGGCCCTCTAACGTCCTTCAAATCCATGCTCGAAGGTGACTGGTACATGGATACTGCTATTAATTCATCTCACCAGGGCCTCCCTAGTCTCCAAGATCACCAAGAAACCAGAGATATTGGCTTTTGTTCAAATCCGGCTGATAATTTCCTGTTACAGCCTATGGATTCATCTTCTTGTTCCCCGTCATTCACTATCGACCCGTCACAGTCACAGCCATTTTTACCACCCAAATCGTGCTTACCTTCTCTCTTTAACGTTGCTTGCAACAACCCTTTTGACAATGGCTTCGATTTGGGCTCTGAAAGTGGGTTTCTCGGCCAGTTCCCGGGACATCAGACTTCGAATTCCCCTGTTCTGATGGGGTTTTCGGGCTTGAACAGTCAACCTCAGATGGGCAACCTCGAGCTTAGTTCAAATGCTGAATTCCCAGCAACTCGGTTGTTGACAGTTGCTGACAATGCCGTCGCACTTGGTGGTGGATTTAGTTCGACGGGTTTAGAAGGATTTGATGGTTCCGGAAGTACTCTGTTTTCAAACAAGGCTAAGGTTTTGAGACCACTTGATATTTTTCCTCCGGTTGGTGCGCAACCCACTCTCTTTCAGAAGCGAGCTGCGCTTCGCCAAATCTCCGGTGGCGCTGATAAATTGAGAACTTTGGAGATTTCGGCGTCCAGATTTGAGGATAACTCAAACATGGAGAGGAAGAGGAAGATAGCAGAAGAGGGTGAAATCGAGGAAGCTAGTTTCGATGCGTCCGGATTGAATTATGATTCTGATGAGCTTAATGAGAATAATAAGGTGGAGGAGAATGGGAATAACGGGGGAAGCAATTCTAACGCAAATAGTACGGTCACAGGTGGAGACCAGAAGGGGAAGAAGAAGGGGCTACCAGCAAAAAATCTCATGGCCGAGAGAAGGCGCAGGAAGAAACTAAATGATAGGTTGTACATGCTTCGGTCGGTTGTGCCGAAGATTAGCAAGATGGATAGGGCTTCGATTCTCGGGGATGCAATTGACTACTTGAAGGAGCTATTGCAGCGGATCAACGATCTTCATAATGAGTTGGAGTCCACTCCACCTGGTTCACTGCCACCACCTTCTACAAACTTCCACCCTTTGACACCCACTCTACCAACCCTTCCCTGCCGGGTCAAGGAAGAACTTTGCCCAAGCTCCTTGCCAAGCCCTAAGAACCAACCTGCGAGAGTGGAGGTCAGGTTAAGGGAAGGGAGAGCTGTGAACATCCATATGTTTTGTGCCCGCAGACCAGGTCTTCTGCTTTCCACCATGAGGGCATTGGACAACCTTGGATTGGACGTTCAGCAGGCTGTTATCAGCTGTTTCAATGGCTTTGCTTTAGATGTGTTCAGAGCTGAGCAATGCAGAGAAGGCCAGGATGTACCCCCTGAGCAAATTAAAGCAGTACTGTTGGATTCAGCGGGTTGCCATGCAAAGTTTCAGCGAGTGTTTTATGGTGGTGGCCATGGTTTGGCTTTCAAAACAACTATAGAAAAGCTTCTGGTTTATGAGAGAACGGTGGAAAGAAGTCTGACCAACACAGTAGAGTTTGATGAAATAATTCTACTTACAATAACATCACTAAATGGAGGAGCATCTCAGTCCTTTCCCATGATGCATTTAGTAGGCTTATTTGTTGTCATTCGAGAAGGGTGGAACAGGGGAGGGCACCATATCAAGCACGTTTTGGCATTCTTCCGTGGGACTTTCAGCAGTGGAGGGCCTCCACGGCGGGAGCCACCTTCGTCTTGGCTTTCATTCAGTCTATGGAAGCTCGCGTTCAAATTTGAAGCCACCACAGAGCTTCTTTTTCTCTCTCTGAAGGAACCTCACTGTATCCCAACCCTGACGTTTATTCATTTTTCTACATTTGGAGCTTCTCTAGAAGAACCCGCCTCTGCATTCTCACCTCCAGAAGCTCTTTCCTGCAAGTTCAGCGCCTCGCTTCCCCTGAGTAAAACAGGCATGGCTAACGTGTTGCAGTTTAGTGGCATTAAAAATACCTTCCCTGTGGCTTCGAGGAGAAGTTTGCAGTGCCAACCTCTGTTGTCACAAAAAATTGGTTTTGCAGCATCTGCTGCTCCTGTTTTTGGGTTATTTTGTAAAGGAAATCTTCCAAGTAAAAAGGTGGCATTCAGTATCAGCTGCAAGGCAATAGATAGTGATCTACTTGAGGAGAACGAGAATGAAAATGGGGGCCTTAGTGGAACTGAGAAACCATTCACCTGCGTCATGAAGTTTGGTGGCTCATCGGTGGCTACTGCAGAGAGGATGAGAGAGATTGCTAGTCTTATACTAAGCTTTCCAGAAGAGAGTCCTGTAATTGTTCTCTCTGCGATGGGAAAGACAACTAACAAACTTTTACTGGCTGGAGAAAAAGCTGTAAGTTGTGGGGTTACAAATGTCTCTAGTATTGATGAGCTTAGCTTCATAAAAGACCTCCATATCAGGACTGTTGATGAGCTTGGAGTGGACAGGTCTGTCATTGCAAAGCATCTAGAAGAATTGGAGCAACTTCTGAAGGGGATTTCTATGATGAAAGAGTTGACTCTAAGAACTCAAGACTATTTAGTTTCATTCGGAGAGTGCTTGTCCACTAGGATCTTTGCTGCTTGTCTTAACACAATGGGTGTTAAGGCTCGTCAATATGATGCATTTGAGATTGGTTTTATAACAACTGATGACTTCACAAATGCGGACATTCTGGAAGCTACTTATCCAGCTGTTGCAAAGAGGTTATACAGTGATTGGGTTTCAGATCCTGCAATTCCAATTGTTACGGGCTTCCTTGGAAAGGCCCGGAAATCATGTGCAGTGACAACACTGGGTAGAGGGGGCAGTGATTTGACAGCAACAACAATTGGGAAAGCACTAGGGTTGCCTGAGATCCAGGTTTGGAAAGATGTTGATGGTGTTCTAACCTGTGATCCAAATATATGCCCTCAAGCAGAACCTGTCCCATATTTAACATTTGATGAGGCAGCAGAACTTGCTTACTTTGGTGCTCAGGTCCTGCATCCACAGTCTATGAGACCTGCAAGGGAAAGTGACATTCCAGTTAGGGTTAAAAATTCTTACAATCCTAAAGCTCCGGGTACTCTTATTGCCAAGACAAGAGACATGAGCAAGGCAGTATTAACTAGCATTGTTCTGAAAAGTAATGTTACCATGTTGGATATTGTAAGCACTCGCATGCTTGGTCAGTATGGCTTCCTTGCTAAGGTCTTTTCAATCTTCGAGGATTTAGGCATATCAGTAGATGTTGTAGCTACAAGTGAAGTAAGTATTTCCTTGACATTGGATCCATCAAAGCTATGGAGCAGAGAACTAATTCAGCAGGAACTTGATTATGTTGTTGAAGAACTGGAGAAAATTGCTGTGGTAAATCTCCTACAGAACAGATCTATCATTTCTCTCATTGGAAATGTTCAGAGGTCATCACTGGTATTGGAGAAGGCATTTCATGTTCTTCGAACCCTTGGGGTCACTGTTCAGATGATCTCCCAAGGTGCATCTAAGGTGAATATCTCTTTGGTTGTAAATGACAGTGAAGCAGAGCATTGTGTGAAGGCTCTCCACTCAGCTTTCTTTGAGAGTGAGCTTTCTGAATTAGAGAAAGAATATGTATCTGGAAATGGTTCTGTTTCTGTATTATCGTAG 3801 0.4517 MDRDMLQRAHGVPWMEEVEDAASWTRTNNEGESKDEDIALGGPLTSFKSMLEGDWYMDTAINSSHQGLPSLQDHQETRDIGFCSNPADNFLLQPMDSSSCSPSFTIDPSQSQPFLPPKSCLPSLFNVACNNPFDNGFDLGSESGFLGQFPGHQTSNSPVLMGFSGLNSQPQMGNLELSSNAEFPATRLLTVADNAVALGGGFSSTGLEGFDGSGSTLFSNKAKVLRPLDIFPPVGAQPTLFQKRAALRQISGGADKLRTLEISASRFEDNSNMERKRKIAEEGEIEEASFDASGLNYDSDELNENNKVEENGNNGGSNSNANSTVTGGDQKGKKKGLPAKNLMAERRRRKKLNDRLYMLRSVVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPPSTNFHPLTPTLPTLPCRVKEELCPSSLPSPKNQPARVEVRLREGRAVNIHMFCARRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCREGQDVPPEQIKAVLLDSAGCHAKFQRVFYGGGHGLAFKTTIEKLLVYERTVERSLTNTVEFDEIILLTITSLNGGASQSFPMMHLVGLFVVIREGWNRGGHHIKHVLAFFRGTFSSGGPPRREPPSSWLSFSLWKLAFKFEATTELLFLSLKEPHCIPTLTFIHFSTFGASLEEPASAFSPPEALSCKFSASLPLSKTGMANVLQFSGIKNTFPVASRRSLQCQPLLSQKIGFAASAAPVFGLFCKGNLPSKKVAFSISCKAIDSDLLEENENENGGLSGTEKPFTCVMKFGGSSVATAERMREIASLILSFPEESPVIVLSAMGKTTNKLLLAGEKAVSCGVTNVSSIDELSFIKDLHIRTVDELGVDRSVIAKHLEELEQLLKGISMMKELTLRTQDYLVSFGECLSTRIFAACLNTMGVKARQYDAFEIGFITTDDFTNADILEATYPAVAKRLYSDWVSDPAIPIVTGFLGKARKSCAVTTLGRGGSDLTATTIGKALGLPEIQVWKDVDGVLTCDPNICPQAEPVPYLTFDEAAELAYFGAQVLHPQSMRPARESDIPVRVKNSYNPKAPGTLIAKTRDMSKAVLTSIVLKSNVTMLDIVSTRMLGQYGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKLWSRELIQQELDYVVEELEKIAVVNLLQNRSIISLIGNVQRSSLVLEKAFHVLRTLGVTVQMISQGASKVNISLVVNDSEAEHCVKALHSAFFESELSELEKEYVSGNGSVSVLS 1266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1770 1266 FunFam Aspartokinase 828 924 - -
Dere02g1770 1266 PANTHER ASPARTATE KINASE 789 1246 - -
Dere02g1770 1266 FunFam Aspartokinase 1103 1174 - -
Dere02g1770 1266 MobiDBLite consensus disorder prediction 22 41 - -
Dere02g1770 1266 MobiDBLite consensus disorder prediction 308 329 - -
Dere02g1770 1266 Gene3D - 791 1082 IPR036393 -
Dere02g1770 1266 ProSitePatterns Aspartokinase signature. 791 799 IPR018042 GO:0004072|GO:0008652
Dere02g1770 1266 FunFam Aspartokinase 1 1175 1244 - -
Dere02g1770 1266 Gene3D - 330 399 IPR036638 GO:0046983
Dere02g1770 1266 Gene3D - 1094 1244 - -
Dere02g1770 1266 Pfam Helix-loop-helix DNA-binding domain 343 385 IPR011598 GO:0046983
Dere02g1770 1266 Gene3D Aspartokinase, catalytic domain 828 924 IPR042199 -
Dere02g1770 1266 CDD bHLH_AtAMS_like 339 406 - -
Dere02g1770 1266 ProSiteProfiles ACT domain profile. 1107 1185 IPR002912 -
Dere02g1770 1266 MobiDBLite consensus disorder prediction 295 341 - -
Dere02g1770 1266 Pfam Amino acid kinase family 789 1071 IPR001048 -
Dere02g1770 1266 Coils Coil 379 399 - -
Dere02g1770 1266 SMART finulus 342 391 IPR011598 GO:0046983
Dere02g1770 1266 SUPERFAMILY ACT-like 1175 1253 IPR045865 -
Dere02g1770 1266 Gene3D - 1103 1178 - -
Dere02g1770 1266 CDD ACT_AK1-AT_1 1102 1179 - -
Dere02g1770 1266 SUPERFAMILY Carbamate kinase-like 791 1084 IPR036393 -
Dere02g1770 1266 FunFam Aspartokinase 897 1082 - -
Dere02g1770 1266 CDD ACT_UUR-ACR-like 456 516 - -
Dere02g1770 1266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 339 406 IPR036638 GO:0046983
Dere02g1770 1266 SUPERFAMILY ACT-like 1091 1189 IPR045865 -
Dere02g1770 1266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 336 385 IPR011598 GO:0046983
Dere02g1770 1266 CDD AAK_AK-LysC-like 789 1082 IPR041746 -
Dere02g1770 1266 FunFam BHLH transcription factor 332 400 - -
Dere02g1770 1266 NCBIfam aspartate kinase 790 1245 IPR001341 GO:0004072|GO:0008652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1770 Dere-ChrDere02 17566508 17579230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1770 23 500 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 57.347 1.48e-150 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g1770 AA_kinase 1.2e-46 No_clan