Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1765 ATGTCCATCTTGCCCGCACAAACCCAGGCATCAACCTCGTCATCTTCTCAATCTCCTCTAACTCCAAACCCTAATTCCCAACATGGAAACCTCCTTCACTCACCTGCTTCTTCCCCATCCCTCTCCTCTCCCCTTCAAGTTCAATCATTCGGATCTCTGCGAATCTCCGATTTCCAATCTCCCGTCGCATTGCCCGACGCCTATTCAGGTCCATCGACTCCAGCTACAGAAGATTCTGGTGGACCTTCCGAAAAGGTGACAGAGTTAGGATCTCCAAGTGGTATGAAGAGTTTGCCTCACCAAAACTCCAGAACACATTCCCAGAATCACTCAGGAAGACGGGCAGTTAGATCATCCCAGTCAGCAACAAAGATGACAGGAACAGTTGCTTCTCCTGGAGATCAACAAAATACTCGGTCTGTAAATTCTCATGGGAGCACTGCTTCTGCAGGAAGAAAATATCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCTCCCCCACCAAGAAGGCAGCCGAAGAGAAAACCATACAACAAAGATTTATTCTTACAGGCAAATTACAAATTCATGGTGTTAGATTCAGGAAATTATTCAACTGAATCTTTGGACCCAGATAAAATGTTACAGTGGGAAGATATTATATGTCTGAGGTATTCCACCCCATTCTCTGTTCAGTGTCCAATTTGTTTGGAGTGTCCTCTGTGTCCACAAATAACCTCTTGTGGACATATTTTTTGTTTCCCTTGTATCTTGCAATATTTGATGATGGGTGAAGAAGATCACAAAGGTGATTGCTGGAAAAGGTGTCCCTTATGCTTTGTGATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAATGTTAAGCAGTATCAAGTGGGAGATATTATTGAGTTCAGACTTTTAACTCGTAAGAAGGATTCCTTTTCTCTGTCTCATAAAAATAAACAAGAAACAGATGTCGTATCATGTGGCAATGATAATTTGTGTGATCCTTTCTCTAAGTTCACACTCACATCAGATGTAGATCTCTCCGTGAGACAGGCAATATCAGATCTAGATGGTTGGCTAGCTAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAAGTATTTGAATGAGCATAGGGCTTGCAGTGCTGACAAAGTCTCTAGACTTATCGATTTTGTAGATCACAAACCATCAACAGCTGTAAATACCACTGATTTTGATGCTGAAACCCATTCCAATGGATTGGGAATTACCTCTACAGATGTGCATGACCAAAGAAAGGGTACAATATTGGATAAGTCAAATGCAGGTGCTTGTCAAGATCAAACTGTGGATGTGGAGAAAGTACTAGAACACGAAATGAATTTATCTTCTTCCTATGAGGAGAAAAATGATATTCAAAGTCATCTAAACAGTCTTGGAGATGCAAAAGAAAGTGACTCGTACAATTTCTACCAGGCTTCTGATGGTCAGCATCTCATTCTTCATCCCCTGAATATGAAATGTCTACTTCACCACTATGGGAGCTATGATAACCTTCCCCACAGAATAAGTGGAAGAATTCTGCAGTTGGAGACAGCCACTCAGTCAGAGGCCATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTGACAACAACATTTCAGCTTTGTGAAATTGATCTGAGTGAGATGCTGCCTTCTGAAGCACTGGCCCCATTTATGGATGAAATGAAGAAGCGTGCAAACCAGAGGAAGCAACTTGCAAAGAAGGAACGAAAGGAGAAAATCAAGGCCAAAGCTGCTTCTACATATTCTCTTCCCATACCAACCTGTTCCCAGCTTATGTCTCGTGACAATTCTCCAACATTCTCCATGGATGATTTTGAAGCTTTGGGAAATTCTGCTGTATCATCAAGTGCCCCTGTTGTGGGGGGTAGAAATTTGTTTTCAAATGTTACAAGGCTTGGTTACGCTGCTGGTCATGATTCTCCATCATTGAACTTTCAAGCGACTAATGATCTACATAATCACAATATGAAAATTGATTCTTCTGGCACAACAGGTTTGAGAAATGTGGAGACACCATCATTCGCCAATGTCATATCTAGAGCAGAGTCTAATAATAGCTTGAATGCACCCAAGACAAGTGACTTGGGGAAGAAGGGAAAGAAACCAGCTCGAGTTCTTCTGTCAACAGCAGGTGGTAGGCGTTATTGA 2289 0.4185 MSILPAQTQASTSSSSQSPLTPNPNSQHGNLLHSPASSPSLSSPLQVQSFGSLRISDFQSPVALPDAYSGPSTPATEDSGGPSEKVTELGSPSGMKSLPHQNSRTHSQNHSGRRAVRSSQSATKMTGTVASPGDQQNTRSVNSHGSTASAGRKYQMVNGNHLLNFHYDPISRPQARGPPPPPPRRQPKRKPYNKDLFLQANYKFMVLDSGNYSTESLDPDKMLQWEDIICLRYSTPFSVQCPICLECPLCPQITSCGHIFCFPCILQYLMMGEEDHKGDCWKRCPLCFVMISAKDLYTIYIENVKQYQVGDIIEFRLLTRKKDSFSLSHKNKQETDVVSCGNDNLCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYLNEHRACSADKVSRLIDFVDHKPSTAVNTTDFDAETHSNGLGITSTDVHDQRKGTILDKSNAGACQDQTVDVEKVLEHEMNLSSSYEEKNDIQSHLNSLGDAKESDSYNFYQASDGQHLILHPLNMKCLLHHYGSYDNLPHRISGRILQLETATQSEAMRRRYRYLSHFPLTTTFQLCEIDLSEMLPSEALAPFMDEMKKRANQRKQLAKKERKEKIKAKAASTYSLPIPTCSQLMSRDNSPTFSMDDFEALGNSAVSSSAPVVGGRNLFSNVTRLGYAAGHDSPSLNFQATNDLHNHNMKIDSSGTTGLRNVETPSFANVISRAESNNSLNAPKTSDLGKKGKKPARVLLSTAGGRRY 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1765 762 ProSiteProfiles Zinc finger RING-type profile. 241 287 IPR001841 -
Dere02g1765 762 Coils Coil 598 622 - -
Dere02g1765 762 SMART ring_2 241 287 IPR001841 -
Dere02g1765 762 MobiDBLite consensus disorder prediction 729 762 - -
Dere02g1765 762 CDD RING-HC_RNF10 239 296 - -
Dere02g1765 762 MobiDBLite consensus disorder prediction 1 46 - -
Dere02g1765 762 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 234 302 IPR013083 -
Dere02g1765 762 PANTHER RING FINGER 10 FAMILY MEMBER 74 762 IPR039739 -
Dere02g1765 762 MobiDBLite consensus disorder prediction 62 149 - -
Dere02g1765 762 MobiDBLite consensus disorder prediction 165 192 - -
Dere02g1765 762 MobiDBLite consensus disorder prediction 94 149 - -
Dere02g1765 762 SUPERFAMILY RING/U-box 240 293 - -
Dere02g1765 762 FunFam RING finger protein 10 234 302 - -
Dere02g1765 762 ProSitePatterns Zinc finger RING-type signature. 256 265 IPR017907 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1765 71 712 C3H Transcription Factor Family AT3G26730 52.381 0.0 630