Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1762 ATGATGGAAAATAATGAGATATTGTTTCCTGAGAAAAGAATTGGCAATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCACGTGCTGAGATGGTTGTTGTTGGTTTTCATAGCCACTGGCTGAATGGCATTGATTATATGGGCCAATCCTATTCCAAAGTGGTAATGCCATCTATACTTGATATGCACAGTAATTATGAATTTCCACTTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATTTGACTGGTGATAAACGTCAAATTCGAGATCAGGTGTTAGAGCGGGGTAATCTGGCACTCAAGGTAGTCCTTTCTGTTTCCCTTGTCTTCTTCCTCTCATCTTTTTCTTGCCCCATTTTTCTTGCCCTGAGACAGCTGTCCTTAATAATTGAGAAGGAAATGACATTCTCCTCTTCTAATGCTATTAATTTTTTTGGGGAAGAGGGGGTTTGCTACTGTTATATTTGTGATAATGCTGCCTTTAATGATGAAGAGGATGCCATTGAGATCTCCCAGAACTGTGTTGAGCAATGTGTGCCTGTAAGGGTGGTTCGTGGTCATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGATTGTATAAGGTTGTAAACTATTGGGCAGAAAAGGGAATATCTGGGTTTACCGTCTTTAAGTTTCGGCTTAGGAGGCTTGAAGGGCAACCAATCTTGACCACTAACCAGGTATATTTCACTAATGGACGTGTTCCTCAGTCTGCTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCAAAGGTCAAGAAGATATGCCTATTCCTGCCACTAATCTGGTTGATGACCCTGCTGTTGCACCCACAGGTTTCAAATATAGTAAATCAATTTTGGTTTCAAAAAATGTAAAGCTCCCCAAAGATTCTACTGGATGCAATTGCAAAGGCTTATGTGTCGATCCTACATCTTGTGAATGTGCTTTACGAAATGGCTCTGATTTTCCCTATGTATCTCGTAATGGAGGCAGGTTAATTGAAGCCAAAGATGTTGTTTTCGAATGTGGGCCAAAATGTGGATGTGGTCCAGGTTGTGTTAATCGAACTTCTCAAAGAGGACTGAGATACCGTCTTGAGGTTTTTCGTACTCCAAAGAAAGGATGGGCTGTTCGATCTTGGGATTTCATACCTTCTGGTGCACCGGTTTGTGAATACACAGGATTACTCAGGAGGACAGAGGATATAGAGAATGCATCTGAGAACAACTATATTTTTGAGATAGATTGTTTGCAAACAATGAAGGGTATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTGCAGAAATCAATCTTTTGGACAAATATGAGAACGATTCTGAGTCTGCACCAGAGTTCTGTATTGATGCAGGATCAACTGGAAATATTGCTCGATTTATAAACCATAGTTGTGAGCCAAATTTATTTGTTCAATGTGTTTTGAGCTCACATCATGATTTAAGGCTTGCTCGAGTGATGTTATTTGCTGCAGATAACATACCTCCTTTGCAGGAGCTAACATATGACTATGGATATGCACTCGATAGCGTTTTGGGTCCTGATGGAAAAGTTAAGAAAATGGCGTGTTATTGTGGAGCTGTAGACTGTAAGAAGCGACTATTTTAA 1710 0.4053 MMENNEILFPEKRIGNIPGIKVGHQFYSRAEMVVVGFHSHWLNGIDYMGQSYSKVVMPSILDMHSNYEFPLAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQVLERGNLALKVVLSVSLVFFLSSFSCPIFLALRQLSLIIEKEMTFSSSNAINFFGEEGVCYCYICDNAAFNDEEDAIEISQNCVEQCVPVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGISGFTVFKFRLRRLEGQPILTTNQVYFTNGRVPQSAAEIRGLVCEDITKGQEDMPIPATNLVDDPAVAPTGFKYSKSILVSKNVKLPKDSTGCNCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGLRYRLEVFRTPKKGWAVRSWDFIPSGAPVCEYTGLLRRTEDIENASENNYIFEIDCLQTMKGIGGRERRSQNETSAEINLLDKYENDSESAPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMACYCGAVDCKKRLF 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1762 569 SUPERFAMILY PUA domain-like 193 281 IPR015947 -
Dere02g1762 569 ProSiteProfiles YDG domain profile. 15 247 IPR003105 -
Dere02g1762 569 SUPERFAMILY SET domain 275 546 IPR046341 -
Dere02g1762 569 Gene3D SET domain 271 569 IPR046341 -
Dere02g1762 569 ProSiteProfiles SET domain profile. 390 539 IPR001214 GO:0005515
Dere02g1762 569 Gene3D - 1 139 IPR036987 -
Dere02g1762 569 Gene3D - 151 264 IPR036987 -
Dere02g1762 569 Pfam Pre-SET motif 281 382 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g1762 569 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 561 - -
Dere02g1762 569 SMART set_7 390 545 IPR001214 GO:0005515
Dere02g1762 569 Pfam SET domain 401 539 IPR001214 GO:0005515
Dere02g1762 569 SMART G9a_1 10 251 IPR003105 -
Dere02g1762 569 SUPERFAMILY PUA domain-like 1 124 IPR015947 -
Dere02g1762 569 Pfam SAD/SRA domain 14 251 IPR003105 -
Dere02g1762 569 ProSiteProfiles Pre-SET domain profile. 325 387 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g1762 569 ProSiteProfiles Post-SET domain profile. 553 569 IPR003616 -
Dere02g1762 569 SMART preset_2 278 374 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1762 Dere-ChrDere02 17520841 17530501 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1762 192 569 EF-hand Containing Proteins AT5G13960 67.282 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere02g1762 SAD_SRA 5.1e-44 CL0178