Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1757 ATGATCAGCAAACTTAATCAGAGAGAAGAAGAGGCATCAGAGGAGGAAAAAAGGGAAGATTTCATCTTTCCCGTATTCCCGTCACTATCTCAGACCCAAACAGAAGAATCTTCAGCCTCTCCATTTCCCTATCTTATCAACACCAGTAGTACCACCTTCCCAATCCCACAAGTAACTGCCTCTTCTGGTTTGATTGAGACTCAGATCAACTCATCCCAGCCTATACCTCAAGGAAATATTATAGGAAGGAAAAGACATTATAGAGGAGTTAGGCAGAGACCATGGGGGAAGTGGGCCGCCGAAATCCGAGACCCAAAGAAAGCAGCAAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGAAGCAGCCGCTGCATATGATGCTGCAGCCTTGAGGTTCAAAGGAAACAAAGCCAAGCTTAATTTCCCTGAACGTGTAGCTAATTTTCCAACTCATCAACCTTCAGCTCCTCCTCCTCCGCCGCCGCCGTATGAGGTGGCGCCACCACCAGTTTTTCAACTTCCATCGGACGAGGGGTTTCCAAACCTAATGCAGTACGCTCAGGTGCTTTGCAGTAGGGACGATGATGACCTACAACGTGCTGCTTCGGGTCTTTATAATTATCAGAATATTAATGACTCATTTATTTATGATTCTCCTCTATGCTTTTCATCATCATCGTCGTCGTCAGCAGTGACTTCATCAACTTCCATGGCTGCGCCTGATCAACTTCACGGTGAACAAATGGGTGATCATAGTTCTTCTGGTTCTTATTTTTTTCATAAAGGGAGTGATTTTGATGGAAGCAACACAAGACGGTGA 822 0.4586 MISKLNQREEEASEEEKREDFIFPVFPSLSQTQTEESSASPFPYLINTSSTTFPIPQVTASSGLIETQINSSQPIPQGNIIGRKRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEEAAAAYDAAALRFKGNKAKLNFPERVANFPTHQPSAPPPPPPPYEVAPPPVFQLPSDEGFPNLMQYAQVLCSRDDDDLQRAASGLYNYQNINDSFIYDSPLCFSSSSSSSAVTSSTSMAAPDQLHGEQMGDHSSSGSYFFHKGSDFDGSNTRR 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1757 273 PANTHER DNA-BINDING DOMAIN 35 225 IPR044808 GO:0003700|GO:0009873
Dere02g1757 273 Pfam AP2 domain 86 135 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 CDD AP2 86 144 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 SMART rav1_2 86 149 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 MobiDBLite consensus disorder prediction 232 273 - -
Dere02g1757 273 Gene3D AP2/ERF domain 85 146 IPR036955 GO:0003700|GO:0006355
Dere02g1757 273 SUPERFAMILY DNA-binding domain 86 144 IPR016177 GO:0003677
Dere02g1757 273 PRINTS Ethylene responsive element binding protein signature 109 125 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 PRINTS Ethylene responsive element binding protein signature 87 98 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 ProSiteProfiles AP2/ERF domain profile. 86 143 IPR001471 GO:0003700|GO:0006355
Dere02g1757 273 MobiDBLite consensus disorder prediction 232 260 - -
Dere02g1757 273 FunFam Ethylene-responsive transcription factor 2 85 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1757 Dere-ChrDere02 17494983 17496589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1757 83 206 AP2-EREBP Transcription Factor Family AT5G13330 56.391 6.89e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g1757 AP2 3.2e-15 CL0081