Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1750 ATGGCTCTTCTTCTGTGTCTGCTTTTTCTTGCCTTTGCCTTTCTCTTCACCGACCATAGCTCAAAAGCTCTTGCCACTTCGATTTCCAGCGATGCATTGTCCCTTCTCAGCTTCAGGGACTCTGTCTCTTCCGCATCTTCTAACCTTCTCTCTGGATGGAGTAACGAGTCTTCCAGAAGTCACTGTCAATGGCTCGGCGTCACCTGCGACAATAGGCTCTCGGGCAGAGTTATTGTTTTGAACTTGACCGGACTTCTCGGCGGCGAGCTCCCTCCTTCCATTGGTGACCTGTCTGAGCTTCGGGTTTTGTCCATTCCTCACAATATGTTCTCCGGTGAGATCCCGGAGAGTATGGGGAAGCTTCGGCATCTGGAGGTTCTTGAGCTTCAAGGAAACAATTTCTCCGGGAGGATCCCCGACCAGATAAGCTATCTTCCTTCTCTTCGCATTCTTAACCTCTCTAATAATGCTTTCTCTGGTTATATGCCCAATAAATTGATTGGCTCTGGCAATGTTAGCGTCCTTGACTTATCGAATAATCAGCTTTCTGGTCCAATTGCAGCAGATAGTTTGGTTACTGTCTGTGGATTTTTGAATCATCTAAAACTGTCCCACAACTTTCTTACGGGCAAAATCCCCTCCCAAATCGGGAAATGCAAAAATTTGAGGACGCTTTTACTGGATGGGAATATCTTAGAAGGTGGTATCCCATCCGAGATTGGTTATATTATGGAACTCAGAATTTTAGATGTTTCTAGAAATAGTCTCACTGAAAGGATTCCAAAAGAGATAGCTAACTGCCGGAAACTGTCTGTGCTTGTGTTGACTGATTTATTCGACGATCTTGCTCCCGCTGATGGGAGCTTGGTGAATAGCTTTAGAGGAGAATTCAATGCCTTTGTTGGAAATATACCTCCTCAAGTGTTGTTGCTTTCTAGTTTAGAGGTTTTATGGGCACCAAGAGCCAATCTTGGTGGACGGTTGCCAAGGGGCTGGACATATTCGTGCTCGCTGAGGGTACTCAACTTGGCAGAGAATTATATTACTGGGGTGATACCAGAAAGTTTGGGAATGTGCAAAAATTTAACTTTCTTGGACTTGAGTTCTAACAATTTAGTGGGGTATCTTCCTTTAAAGCAGCTTCAAGTTCCATGTATGGTGTACTTCAATGTCAGCTGGAATAATTTATCTGGCACGCTTCCAGGATTTGGGCAAGAAAGCTGCGGTATAAGCAGAATCTCAGTTGATGCATATCTTGATATTCCAGTTTGGGAATCTCAGATGGACGCTCTCATTGGATCAGATTCAGAAAATACTATATTCATTAGCCATGATTTCAGTTGGAATAGCTTCATGGGATCTTTACCTTTATTCTCACTTGGAGATAATCTTTCTGCTACAAACAATAAGATCTCCTACATGCTATTACTAAATAATAACAAGTTCAGTGGAACTCTACCATATCATCTGGTTTCAAACTGTAATGATCTCAAGACGTTGAAGGTTAATTTGAGTGTGAACCAACTCTCAGGTGGGAATTCCCAAGAATTGCTTCTTGGCTGTTTGCAGTTGACAGAGTTTGAGGCAGCATACAACCAGATTGCGGGGTCACTCGGTCCTGGTATTGGTGACCATACGATGCTTCAACGTCTTGATTTGAGGGGGAACAAACTATCTGGGTTTTTGCCTGATCAATTGGGAAACCTGAAAAACATGAAATGGATGCTTCTAGGAGGAAACAATCTAACTGGAGAAATCCCTTCTCGACTTGGTCAATTGGCTTCCCTTGTTGTTTTGGATCTATCTCACAACTCTCTAACTGGAATAATTCCTGCAAGTTTGACCAATGCCACAGCTCTTGAAACTCTGTTGCTAGATCATAACAAGCTCAATGGGGAAATACCTTCATCTTTTTCCTCTCTTTCCAGTCTTATTGAACTTGATGTGTCTTTCAACAACCTTTCTGGTCATATTCCTCATCTTCATCACCCAAGTGATTGTGACGGCTACAGAGGAAATGAACTCCTGCATTCTTGTCCTGATCCATACTCTCCCTCCCCTGCTTCTCTCCCAGTCCCTCTTGAAGTCCAAAATTGGCATAGACGAAGAAAATTGAAGACAATGATAATTGCTGTGGTCTCTTCAGTTTCTGTGGCTCTCTGTGTACTACTGGGAATAGTATTGGTGTTCACTATTGGAAGGAAGAAACTTGGTCGGCTTAGCAGCCTTCGAAGCAGACTGCTAGTGACCTTCCAAGATGTTCCAATTGAACTCAATTATGATAACGTTGTCGCTGCCACAGGAAATTTCAGCCTTCAAAATCTAATTGGAACCGGTGGGTTTGGGTCTACTTACAAGGCAGAACTATCCCCTGGTTTCCTTGTTGCCATAAAGAGATTGTCCATAGGTAGATTCCAAGGTATTCAACAGTTTGAGACAGAGATAAGAACCTTAGGGAGAATCCGACACAAAAATCTTGTCACTCTCATTGGCTACTACGTAGGAGAAGCCGAAATGTTCTTGATATACAACTACCTTTCTGGTGGGAACCTTGAAACCTTCATACACAACAATTCAGACAAAAATGTGTTGTGGCCAATTATCTACAAGATAGCAGTGGACATAGCAGAGGCCATAGCTTACCTTCATTACTCCTGTGTTCCTCGCATAGTTCATCGTGACATCAAGCCCAGCAACATCTTACTCGACGAGGATCACAATGCCTACCTTTCAGATTTTGGGTTGGCCAGACTCATGGAGGTATCTGAGACCCATGCCACTACTGATGTGGCAGGCACATTTGGGTATGTTGCACCTGAATATGCCACCACTTGCAGGGTTTCCGACAAAGCAGATGTTTATAGTTTTGGTGTCGTGTTACTAGAATTAATGTCGGGAAGGAAGTCACTTGATCCATCTTTTTCTGAATATGGAAATGGGTTCAATATTGTACCGTGGGCTAAGTTGCTAATGACGGAAGGTCGTTCTTCTGAACTGTTCTCACCTGGTTTGTGGGAAGCAGGGCCTGAGGATAAACTGTTGGGTCTTTTGAAGGTTGCGTTAATCTGCACAATGGAGACGCTTTCTATTCGGCCATCGATGAAACAGGTTCTCGAGAAATTGAAACAACTCAAGAATTGA 3141 0.433 MALLLCLLFLAFAFLFTDHSSKALATSISSDALSLLSFRDSVSSASSNLLSGWSNESSRSHCQWLGVTCDNRLSGRVIVLNLTGLLGGELPPSIGDLSELRVLSIPHNMFSGEIPESMGKLRHLEVLELQGNNFSGRIPDQISYLPSLRILNLSNNAFSGYMPNKLIGSGNVSVLDLSNNQLSGPIAADSLVTVCGFLNHLKLSHNFLTGKIPSQIGKCKNLRTLLLDGNILEGGIPSEIGYIMELRILDVSRNSLTERIPKEIANCRKLSVLVLTDLFDDLAPADGSLVNSFRGEFNAFVGNIPPQVLLLSSLEVLWAPRANLGGRLPRGWTYSCSLRVLNLAENYITGVIPESLGMCKNLTFLDLSSNNLVGYLPLKQLQVPCMVYFNVSWNNLSGTLPGFGQESCGISRISVDAYLDIPVWESQMDALIGSDSENTIFISHDFSWNSFMGSLPLFSLGDNLSATNNKISYMLLLNNNKFSGTLPYHLVSNCNDLKTLKVNLSVNQLSGGNSQELLLGCLQLTEFEAAYNQIAGSLGPGIGDHTMLQRLDLRGNKLSGFLPDQLGNLKNMKWMLLGGNNLTGEIPSRLGQLASLVVLDLSHNSLTGIIPASLTNATALETLLLDHNKLNGEIPSSFSSLSSLIELDVSFNNLSGHIPHLHHPSDCDGYRGNELLHSCPDPYSPSPASLPVPLEVQNWHRRRKLKTMIIAVVSSVSVALCVLLGIVLVFTIGRKKLGRLSSLRSRLLVTFQDVPIELNYDNVVAATGNFSLQNLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGEAEMFLIYNYLSGGNLETFIHNNSDKNVLWPIIYKIAVDIAEAIAYLHYSCVPRIVHRDIKPSNILLDEDHNAYLSDFGLARLMEVSETHATTDVAGTFGYVAPEYATTCRVSDKADVYSFGVVLLELMSGRKSLDPSFSEYGNGFNIVPWAKLLMTEGRSSELFSPGLWEAGPEDKLLGLLKVALICTMETLSIRPSMKQVLEKLKQLKN 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1750 1046 ProSiteProfiles Leucine-rich repeat profile. 361 382 IPR001611 GO:0005515
Dere02g1750 1046 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 734 845 - -
Dere02g1750 1046 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 846 1046 - -
Dere02g1750 1046 SMART LRR_typ_2 546 569 IPR003591 -
Dere02g1750 1046 SMART LRR_typ_2 121 144 IPR003591 -
Dere02g1750 1046 SMART LRR_typ_2 145 168 IPR003591 -
Dere02g1750 1046 SMART LRR_typ_2 641 669 IPR003591 -
Dere02g1750 1046 SMART LRR_typ_2 593 616 IPR003591 -
Dere02g1750 1046 Gene3D Phosphorylase Kinase; domain 1 733 845 - -
Dere02g1750 1046 Gene3D Ribonuclease Inhibitor 24 85 IPR032675 -
Dere02g1750 1046 FunFam Leucine-rich repeat receptor-like protein kinase 28 189 - -
Dere02g1750 1046 Pfam Leucine rich repeat 578 630 IPR001611 GO:0005515
Dere02g1750 1046 Pfam Leucine rich repeat 122 182 IPR001611 GO:0005515
Dere02g1750 1046 ProSitePatterns Protein kinases ATP-binding region signature. 776 798 IPR017441 GO:0005524
Dere02g1750 1046 Pfam Leucine rich repeat N-terminal domain 29 70 IPR013210 -
Dere02g1750 1046 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Dere02g1750 1046 PRINTS Leucine-rich repeat signature 362 375 - -
Dere02g1750 1046 PRINTS Leucine-rich repeat signature 593 606 - -
Dere02g1750 1046 SMART serkin_6 770 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1750 1046 Pfam Protein kinase domain 772 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1750 1046 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 239 1043 - -
Dere02g1750 1046 CDD STKc_IRAK 776 1044 - -
Dere02g1750 1046 SUPERFAMILY L domain-like 464 660 - -
Dere02g1750 1046 ProSiteProfiles Protein kinase domain profile. 770 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1750 1046 SUPERFAMILY Protein kinase-like (PK-like) 749 1041 IPR011009 -
Dere02g1750 1046 SUPERFAMILY RNI-like 83 398 - -
Dere02g1750 1046 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 190 278 - -
Dere02g1750 1046 Gene3D Ribonuclease Inhibitor 86 278 IPR032675 -
Dere02g1750 1046 Gene3D Ribonuclease Inhibitor 434 667 IPR032675 -
Dere02g1750 1046 Gene3D Ribonuclease Inhibitor 288 422 IPR032675 -
Dere02g1750 1046 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 436 685 - -
Dere02g1750 1046 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515
Dere02g1750 1046 Gene3D Transferase(Phosphotransferase) domain 1 846 1046 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1750 Dere-ChrDere02 17422408 17425548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1750 5 1045 Receptor kinase-like Gene Family AT3G02130 43.368 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Dere02g1750 Pkinase 1.6e-41 CL0016