Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1722 ATGAATTCTTGGCTAGTCTTGTTATCACCAACAATGGCTGATGGTCATGAATCAGACAAGAATATTGAGATATGGAAGATCAAAAAATTGATCAAAGCATTGGAAGCTGCCAGAGGTAATGGTACCAGCATGATTTCTCTAATTATGCCTCCGCGTGATCAAATATCCCGGGTGACTAAGATGTTGGGAGATGAATTTGGAACTGCTTCAAACATCAAGAGTAGGGTGAACCGGCAGTCAGTGTTGGGAGCTATTACTTCTGCTCAACAGAGGTTGAAGCTCTATAATAAGGTTCCTCCAAATGGTTTGGTTCTTTATACTGGAACCATTGTTACTGAAGACGGCAAGGAAAAGAAGGTGACAATTGATTTTGAGCCATTCAAGCCTATCAATGCATCCCTTTACCTCTGTGATAACAAATTTCACACTGAAGCTCTGAATGAACTTTTAGAGTCTGATGACAAGTTTGGCTTTATTGTTATGGATGGCAATGGAACCCTTTTTGGGACATTAAGTGGAAATACTCGTGAAGTGCTTCATAAATTTACCGTTGATTTACCAAAGAAACATGGTAGAGGAGGGCAGTCAGCTCTGCGTTTTGCTCGTCTTCGCATGGAAAAACGGCACAACTATGTTAGGAAGACTGCAGAACTTGCTACTCAGTTTTTCATCAATCCTGCTACTAGTCAGCCTAATGTTGCTGGACTTATACTTGCTGGCTCAGCTGACTTCAAGACTGAGCTGAGCCAGTCAGATATGTTTGATCCTCGTTTACAGGCAAAAATATTAAATGTAGTCGATGTTTCTTATGGTGGGGAGAATGGTTTTAATCAAGCTATTGAGCTATCTGCAGAGATCTTATCAAATGTGAAGTTCATACAAGAAAAACGCTTGATAGGGAAATATTTTGAAGAGATCAGCCAGGATACTGGAAAATATGTCTTTGGAGTTGATGACACATTGAAGGCTCTGGAGATGGGTGCTGTGGAAACACTCATCGTGTGGGAAAGCTTAGATATAAATAGATATGTGTTGAAAAATAGTGCTACTGGTGAGATTGTCATAAAGCATTTGAACAAGGAACAAGAGGCTGATCAAAACAACTTCCGAGACCCAGCCACCTCTGCAGAGTTGGAGGTTCAGGAAAAAATGCCCTTGCTTGAGTGGTTTGCAAATGAGTACAAGCGGTTTGGTTGCTCGCTGGAATTTGTGACCAACAAATCTCAAGAGGGATCACAATTTTGCAGGGGGTTTGGTGGCATTGGTGGTATCCTTCGCTACCAGCTTGACATTAGATCATTTGACGAGGTATCTGATGAGGAAGTGTATGATGATTCTGACTAG 1344 0.4129 MNSWLVLLSPTMADGHESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWESLDINRYVLKNSATGEIVIKHLNKEQEADQNNFRDPATSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEVSDEEVYDDSD 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1722 447 Pfam eRF1 domain 1 29 149 IPR005140 -
Dere02g1722 447 SMART eRF1_1_2 16 151 IPR005140 -
Dere02g1722 447 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 17 151 IPR024049 -
Dere02g1722 447 Gene3D eRF1 domain 1 11 146 IPR024049 -
Dere02g1722 447 FunFam Eukaryotic peptide chain release factor subunit 1 13 146 - -
Dere02g1722 447 Pfam eRF1 domain 2 155 288 IPR005141 -
Dere02g1722 447 FunFam Eukaryotic peptide chain release factor subunit 1 147 288 - -
Dere02g1722 447 Pfam eRF1 domain 3 292 429 IPR005142 -
Dere02g1722 447 NCBIfam peptide chain release factor aRF-1 23 428 IPR004403 GO:0003747|GO:0006415
Dere02g1722 447 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 16 440 IPR004403 GO:0003747|GO:0006415
Dere02g1722 447 Gene3D - 290 447 IPR029064 -
Dere02g1722 447 SUPERFAMILY Translational machinery components 153 287 - -
Dere02g1722 447 SUPERFAMILY L30e-like 289 431 IPR029064 -
Dere02g1722 447 FunFam Peptide chain release factor subunit 1 290 447 - -
Dere02g1722 447 Gene3D eRF1 domain 2 147 288 IPR042226 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1722 Dere-ChrDere02 17173514 17175777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1722 12 447 Eukaryotic Initiation Factors Gene Family AT3G26618 91.514 0.0 829