Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1713 ATGGGCATGGAGTCCCTAATCTTCATTTTCTGGGTACTCATAAGCTTAGTACCATCTTCTTCCTTCCAGTTTCAAGAACATCGTAAAGTGCTTCAAATTCAGAAATCAACCACCTCGTATGCCGTAGTCTTCGATGCCGGAAGCACTGGAAGCCGTGTGCATGTCTTCCATTTCAACCAGACCTTAGATCTTCTTCCCATTGGCCAAAATCTTGAGCTTTACGACAAGGTGAAACCAGGATTAAGTGCATACGCTAAAAATCCTGAAAAAGCCGCGGAATCACTTATACCCCTTTTAGAGGAAGCAGAAAGCGTTGTTCCCAAAAGGTTGCGCCCTAAGACACCCGCGAGACTTGGGGCAACGGCAGGTTTGAGGTTGTTGGAAGGAAATGCTTCTGAACTGATCTTGCAAGCGGTTCGGGATATGTTCAAGGAAAAAAGCACTTTCAAGCTTGAAACTGATGCAGTTGCTATTATTGACGGCACCCAAGAAGGCTCTTATCTATGGGTAGCAATTAACTATCTATTGAGCAACCTAGAAAAAGATTATTCAGAGACAGTGGGAGTAATTGATCTGGGAGGAGGATCTGTTCAAATGGCATATGCCATCTCAGAAGCGGATGCTGCTAAGGCTCCCAAAGTAGAAGATGGAGAGGCTCCATACATAACCCAAATGTACCTCAGAGGAACCAAATACTACGTCTATGTTCACAGTTACTTGCATTATGGTAAAGAAGCATCTCGTGCAGAGATCTTAAAGGTTTATGGTGATTCAGACAACCCATGTATTTTAGCTGGCTTTAATGGGTCTTACGTATATGGAGATGTGGAGTACAAGGTCTCAGCCCTCCCTACTGGCTCAAGCTTCAATGAATGCAGACACACAGTTCTCAAAGCTCTCAACGTGAACGCCACGTGTGCACATAAGAATTGCACATTTGATGGGATATGGAACGGTGGAGGGGGACCAGGACAGCAAAACCTTTGTCTTGCCACATCTTTCTATTACCTAGCTACTGAGGCCGGTTTTGCTGATATAAACAAACCCAGCAGCAAAGTTCGTATCATGGACTATAAGATTACGGCTGAGCTTGCTTGTAAGACAACATATGAGGAAGTCAAATCTATTTTCCCGTTAATTAAGGAAGATGTCCTTCCATATCTATGCATGGATCTTGTATACCAGTACACATTGCTGGTTGATGGATTTGGCCTAGATCCATGGAATGAAGTCACAGTGATGAAGCAAGTCAAATATGAGGATTCTTTTGTTGAAGCAGTTTGGCCTCTAGGCAGCGCCATAGAAGCCGTATCTTCTTTACCCAAATTTGAGCGACTCGTGTACTTTGCTTAA 1353 0.4375 MGMESLIFIFWVLISLVPSSSFQFQEHRKVLQIQKSTTSYAVVFDAGSTGSRVHVFHFNQTLDLLPIGQNLELYDKVKPGLSAYAKNPEKAAESLIPLLEEAESVVPKRLRPKTPARLGATAGLRLLEGNASELILQAVRDMFKEKSTFKLETDAVAIIDGTQEGSYLWVAINYLLSNLEKDYSETVGVIDLGGGSVQMAYAISEADAAKAPKVEDGEAPYITQMYLRGTKYYVYVHSYLHYGKEASRAEILKVYGDSDNPCILAGFNGSYVYGDVEYKVSALPTGSSFNECRHTVLKALNVNATCAHKNCTFDGIWNGGGGPGQQNLCLATSFYYLATEAGFADINKPSSKVRIMDYKITAELACKTTYEEVKSIFPLIKEDVLPYLCMDLVYQYTLLVDGFGLDPWNEVTVMKQVKYEDSFVEAVWPLGSAIEAVSSLPKFERLVYFA 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1713 450 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 159 174 IPR000407 GO:0016787
Dere02g1713 450 Gene3D Exopolyphosphatase. Domain 2 160 418 - -
Dere02g1713 450 Pfam GDA1/CD39 (nucleoside phosphatase) family 33 441 IPR000407 GO:0016787
Dere02g1713 450 Gene3D - 40 434 - -
Dere02g1713 450 CDD NBD_sugar-kinase_HSP70_actin 42 201 - -
Dere02g1713 450 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 8 440 IPR000407 GO:0016787
Dere02g1713 450 FunFam Apyrase 1 160 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1713 Dere-ChrDere02 17044951 17048243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1713 35 439 Calmodulin-binding Proteins AT3G04080 59.606 2.18e-168 480