Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1706 ATGGCTAGCCCCCAGTCCAATTTGCCACCTGGGTTTAGGTTCCACCCAACAGATGAGGAGCTCATTCTTCATTATCTCAGGAAGAAGGTCGCCTCCATGCCCTTGCCCGTTTCCATCATTGCTGAGGTTGATATCTACAAGTTTGATCCTTGGGAATTACCTGAGAAGGCAGCGTTTGGGGATAAAGAATGGTACTTTTTCAGTCCTCGAGACCGCAAGTACCCAAACGGTGCGAGGCCAAACAGGGCAGCTGCTTCAGGGTATTGGAAGGCGACGGGCACTGATAAGACCATAGTGGCATCGTTGCCCGGAGGAGGAGCGGCGGAGAACATGGGAGTGAAGAAGGCTCTGGTGTTCTACACTGGAAGGCCCCCCAAGGGCGTCAAGACTAATTGGATCATGCATGAATATCGCCTCCTTGACAACAACAGAAACAGACCAATCAAGTTCCAAGACTCCTCCATGAGGTTGGATGACTGGGTTCTTTGCCGAATATACAACAAGTCCAAGTATGCTGAATCTCCCACACCAGAAGCAGAAGCGGTGGTGGCCGAGCAAGATCTTGCAGAAGAGCGGCTACTGGCATGCTCGAATGCACCCCTTCCTCCTCATAACACTCTGATTTCTCAGAAATCTGTATCTTTCTCGAACCTGTTGGATGCCACCGACTACTCCATGTTGAGCAGCTTCTTGTCCGAGAACTATGCGACCGCACCTGGGTTTGAATCGGGGGCTGCTAATTTTAATACAGGAATTCTGAATCATGATCAGCAATCCTCCCAGAACATCAATACTAGCAATGGCTACATGTTTCAGAGGACCCCCCAATTGAACCCATCGGTCCAAAACATGGAAAACAACATGCACAAGCGTCAGCTTTCAAGCATAAATGAAGATGCCTCATACCCATCGAAGAAGTACCTGAGCTCTTCTTGCAGTTTCCCCAGTAACAGTAACGCCCACGTCCAGAACCCACAATGGAACTTCCTTCTAAAGCAGCCATTGTTGAATCAGCAGTTACTACTGGGTCCTCATCATAGCTTTCAGAGATAA 1053 0.491 MASPQSNLPPGFRFHPTDEELILHYLRKKVASMPLPVSIIAEVDIYKFDPWELPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPGGGAAENMGVKKALVFYTGRPPKGVKTNWIMHEYRLLDNNRNRPIKFQDSSMRLDDWVLCRIYNKSKYAESPTPEAEAVVAEQDLAEERLLACSNAPLPPHNTLISQKSVSFSNLLDATDYSMLSSFLSENYATAPGFESGAANFNTGILNHDQQSSQNINTSNGYMFQRTPQLNPSVQNMENNMHKRQLSSINEDASYPSKKYLSSSCSFPSNSNAHVQNPQWNFLLKQPLLNQQLLLGPHHSFQR 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1706 350 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Dere02g1706 350 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Dere02g1706 350 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Dere02g1706 350 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
Dere02g1706 350 FunFam NAC transcription factor 56 17 173 - -
Dere02g1706 350 PANTHER NAC TRANSCRIPTION FACTOR 56 8 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1706 Dere-ChrDere02 16947822 16949058 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1706 4 349 NAC Transcription Factor Family AT3G04070 49.582 2.07e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere02g1706 NAM 3.6e-40 No_clan