Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1695 ATGAAAGGATCTTGTTGTGGAAACTGGAAAAGTGGTGTTAAATTTTATTATGACTATGAGCCCTCAGGCTTCAGCCAGTCCCACTTACACAATGAAACAGTACGCTTGCTTGCTCTGCCCCTTTCTTTACTTTCTGGGAGCCTTTATATCTGCCGACAAAAAACCGAGGGCCATAAAGGGAGCACTGACGCAGAATTGCGACACCAAAGTTTGGCTTTCGTACTCTTCTCATTTCCTTGCCTTGGTGGGTTGAGAATTCAGAAGAAGTCGAGGGACATGGATGTTTGCCGGAATGTATCAGTTTCCGGCGAGTGCGAACAAGAGCCAGTCCTCTCGCCTTCCTGCACAAAGCTTTCAACCTTCTCAACTACTCTTGACGACCTCTTCTCTTCTCACAACAAGGAAGTTGATGTTGGCTTAGAATGGTTGTCAGTATTCGTGGAAGACTGCTTTTCGAGCCCAGCATGCTGCCCCTTGGCACCTGCTGATGCTCAAACTACAAGTGCAAACTGCGAACCCTCCATACAATTGCAGAGAACCCAGCAAAAGCAGTCGCCTCTGCAAAATTTTGTGGTGCCAGGAAAGGCAAGAAGCAAAAGAAAAAGGCTTTCAGCCCCTAGAACCAAAGACCCATTAAGCATCTGGTCACACCATTTGAACCCACAAAACGAAGCCTTAATTTCTGACCCTCCTCTTCTCAAACAAGCCTACTGGTTAGCTGACAGTGAACTCATGGTCCCCAAAAAGGAAGATAAGCTAGTAGCGACAAAAGATGGAGAAGCAAAGCAAGAGGTGGAAGAGAAGGAGATTGTGAGGAAGGGGGAGAACTTGGGGAGCTTAGTCTTAGAGTGTGAGGAAGGTAGCAATGGGCAGCATCCAGTGCCAAGGAGGTGCAGCCATTGCCTAGCACAGAGGACCCCACAATGGAGGGCCGGACCATTGGGTCCGAAAACACTATGCAATGCATGTGGGGTGAGGTACAAGTCTGGTAGATTACTGCCAGAATATAGGCCAGCCAAGAGCCCTACTTTCGTAAGCTACTTGCACTCCAATTCCCACAAAAAGGTCATGGAGATGAGAATGGCTGTCATGTCTTCTATTCCTACTGAGCACTAG 1116 0.4785 MKGSCCGNWKSGVKFYYDYEPSGFSQSHLHNETVRLLALPLSLLSGSLYICRQKTEGHKGSTDAELRHQSLAFVLFSFPCLGGLRIQKKSRDMDVCRNVSVSGECEQEPVLSPSCTKLSTFSTTLDDLFSSHNKEVDVGLEWLSVFVEDCFSSPACCPLAPADAQTTSANCEPSIQLQRTQQKQSPLQNFVVPGKARSKRKRLSAPRTKDPLSIWSHHLNPQNEALISDPPLLKQAYWLADSELMVPKKEDKLVATKDGEAKQEVEEKEIVRKGENLGSLVLECEEGSNGQHPVPRRCSHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMAVMSSIPTEH 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1695 371 CDD ZnF_GATA 297 344 IPR000679 GO:0006355|GO:0043565
Dere02g1695 371 ProSiteProfiles GATA-type zinc finger domain profile. 296 328 IPR000679 GO:0006355|GO:0043565
Dere02g1695 371 FunFam GATA transcription factor 288 369 - -
Dere02g1695 371 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 294 356 - -
Dere02g1695 371 Gene3D - 288 360 IPR013088 GO:0006355|GO:0008270
Dere02g1695 371 Pfam GATA zinc finger 298 332 IPR000679 GO:0006355|GO:0043565
Dere02g1695 371 SMART GATA_3 292 346 IPR000679 GO:0006355|GO:0043565
Dere02g1695 371 PANTHER GATA TRANSCRIPTION FACTOR 106 363 - -
Dere02g1695 371 ProSitePatterns GATA-type zinc finger domain. 298 323 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1695 Dere-ChrDere02 16859720 16864718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1695 112 360 C2C2-Gata Transcription Factor Family AT4G32890 38.996 9.59e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Dere02g1695 GATA 1.1e-14 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere01g2124 01 35177226 35178412 Dere02g1695 02 16859720 16864718 CCT