Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1682 ATGAATAGTGCCATAGAGGTGGTAACAGTAAAGGGGAAGGCAACAAAAAGCTATAGCCCATATCTCCACCTAATACTTAAGATTGTTGACATTTTTAGGGCGACACAAGTGGGCTGTGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCAAGAAGATCAAAGCGGCTTGGTGATCTTCAACCTGCCCCAGAACCTATTGAAGAGAATTGGGAGCAACCTGCTCCAAACAAAACCAGAAGGAGAGTTGGAGGTGGAAGAGGAAGAGGTGGGAATGCCCCAGCTATAGCAAAAAGGCCTTCTCCAGCCGTACCCACAAGGCGAACTGCAGCTGGTAGGGGACGGGGAGGTAGATTTGCTGATCTTGTTCCTGAACCTGTTGCATTGGGGGCCCCAGAACCTGTTTACAATTGTGCAGAGGCAGCGGCCAATAATAATATTGTTATGGCGGGTGGAAGTGCAGACAAGGTGGTTGGAGCTGAAGAGGAAACATGCACTACCCCCCCTGTTCCTGAAACGGTGCAGGTTGGTAGTTCTCCTTTATATAAAATTGAAACGAAGTTGGGCAAGGGTGGTTTTGGCCAAGTCTATGTTGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCACTGAAGTTTGAACACAGAAATAGTAAAGGTTGCAATTATGGGCCTCCTTATGAGTGGCAAGTCTACAATACTCTGAATGGTTGTTACGGCATTCCCTGGGTTCATTACAAGGGTCGCCAAGGAGACTTCTATATTCTGGTAATGGACATGCTTGGGCCCAGTCTTTGGGATGTTTGGAATTCTCTTGGCCAGTCGATGTCACCAAATATGGCTGCATGCATTGCTGTGGAGGCAATATCAATTCTTGAGAAGCTCCACATGAAAGGGTTTGTGCATGGAGACGTTAAACCGGAAAACTTTTTACTTGGTCAACCAGGAACAGCTGATGAGAAGAAGTTATTTCTTATTGATCTTGGCTTAGCGTCTAAATGGAAAGACACAACATCTGGTCAACATGTTGAATATGATCAGAGGCCTGACATATTTAGGGGAACTATAAGATATGCCAGTGTACATGCACATTTAGGCAGGACTGGAAGTAGGAGGGACGATCTTGAGTCACTGGCATACACATTAATATTTCTTATAAAGGGGAGGTTACCATGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTGTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCCCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAATTATTCCAAGCTTATTTCACTTTTTGATAGCTTGATTGAACCATGTACCCAATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGAGGGCTAGAATGCTTCTAAATCTTGAAGAAGATGAGCAGCCAAAGAAGAAAGTGCGACTGGGGAATCCTGCCACTCAGTGGATTTCAGTGTATAACGCCCGGCGTCCCATGAAGCAGAGGTATCACTATAATGTAGCAGACACTAGGCTCCGACAGCATGTAGACAAGGGTAACGAGGATGGGTTATATATTAGCTGTGTAGCCTCTTCATCAAATCTGTGGGCCTTAACCATGGATGCAGGAACGGGTTTTTCTTCTCAGGTCTATGAGTTGTCAGCAGTCTTCCTACACAAGGATTGGATAATGGAACAATGGGAGAAAAATTACTATATCAGTTCAATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTTCTTACACTCAGCAGTCCTACAAAGTGAGTGAATCATTTCCTTTCAAGTGGATAAATAAGAAGTGGAAAGAAGGATTCCATGTCACCTCCATGACAACTGCTGGCAATCGCTGGGGTGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTTGACTTTTTATACCCAAGTGAAGGTATTCATAGGCGATGGGAGACTGGTTATCGTATAACATCTATGGCTGCCACTGCCGATCAGGCAGCCTTCATACTGAGCATTCCAAAACGCAAATTGCTTGATGAAACACAAGAGACTCTGCGTACCTCTGCCTTCCCTAGCACCCATGTAAAGGAAAAATGGTCCAAGAATCTCTATATAGCCTCAATATGCTATGGGCGGACTGTTTGTTAG 2238 0.4486 MNSAIEVVTVKGKATKSYSPYLHLILKIVDIFRATQVGCDLNGERMPELRSGARRSKRLGDLQPAPEPIEENWEQPAPNKTRRRVGGGRGRGGNAPAIAKRPSPAVPTRRTAAGRGRGGRFADLVPEPVALGAPEPVYNCAEAAANNNIVMAGGSADKVVGAEEETCTTPPVPETVQVGSSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKFEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMAACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLFLIDLGLASKWKDTTSGQHVEYDQRPDIFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPCTQLRPIRIDGALKVGQKRARMLLNLEEDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVADTRLRQHVDKGNEDGLYISCVASSSNLWALTMDAGTGFSSQVYELSAVFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTSYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGNRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWETGYRITSMAATADQAAFILSIPKRKLLDETQETLRTSAFPSTHVKEKWSKNLYIASICYGRTVC 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1682 745 CDD STKc_CK1 184 458 - -
Dere02g1682 745 PANTHER CASEIN KINASE-RELATED 185 709 - -
Dere02g1682 745 Pfam Protein kinase domain 184 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1682 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Dere02g1682 745 ProSiteProfiles Protein kinase domain profile. 184 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1682 745 Gene3D Transferase(Phosphotransferase) domain 1 149 508 - -
Dere02g1682 745 ProSitePatterns Protein kinases ATP-binding region signature. 190 221 IPR017441 GO:0005524
Dere02g1682 745 MobiDBLite consensus disorder prediction 50 120 - -
Dere02g1682 745 SMART serkin_6 184 462 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1682 745 FunFam Casein kinase 1-like protein 155 504 - -
Dere02g1682 745 SUPERFAMILY Protein kinase-like (PK-like) 184 469 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1682 Dere-ChrDere02 16700902 16708566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1682 184 416 AGC Kinase Gene Family AT3G08730 23.404 2.57e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Dere02g1682 Pkinase 1e-15 CL0016