Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1668 ATGTTTCAAAGGGAATCGCATACCAGGGATTACAGTTTAGTCAAATATTTTGATTTGACTATCTTTTTGCAGGAATCATTTGACATCCCTCGTGGTCATGGAGGTGGAGACATCGAGTTAGGGGCATATGTACGAACTTCAGGAGAACTGGGTTTGGATGGTTTCTTCAAGAAGGTTCAAGATCTTGACAAAGAATTTGAGAAGCTGGGTAGGCTTCTGAGAAAGCTCCAGGATGCCCATGAAGAGTCCAAAGCTGTGACCAAAGCTCCTGCCATGAAGGATATAAGGCAGAGAATGGACAAAGATGTTGATGAAGTTAAGAAAACTGCCCATTACATAAAAACGAGAATTGAAGAATTGGACAAAGACAATTTGGCAAATAGGCAGAAGCGTGGGTGCGGAAAAGGATCAGGTATTGATAGGTCAAGAACAGCAACCACCATTGCCATAAAAAAGAAATTGAAAGATAAGATGGATGAATTTCAGACCCTTCGGGAAGCCATACATCAAGAATATCGTGAGGTTGTAGAGAGACGTGTTTTTACAGTGACGGGCACAAGAGCTGATGAGGAGACAATTGACAGATTAATTGAGACTGGAGATAGTGAACAAATATTCCAGAAGGCAATTAAGGAACAAGGACGAGGCCAGATAATAGACACCCTGGCAGAAATTCACGAACGGCATGAAGCAGCTAGAGATGTTGAGAGGAAGCTTCTTGATCTGCAGCAGATATATCTGGATTTGGCAGTGTTAGTTGAAGCACAAGGCGACATTCTTAACAACATAGAATCCCAGGTATCAAGCGCAGTAGATCACGTGCAACAAGGCAATAATGCCCTTCTGAAGGCCAAGAAGGCACAGAAGAGTTCAAGAAAATGGATGTGCATTGCAATAATAATACTTCTCATCGTTATTGTTGTCGTGCTTGCTTCTGTCATCAAACCATGGGGTGATAAAAGGGGAGCGTATACTTTTTCAGTACTGGTTTATCTAGGTGTCACTGACGACCCTGAAAAGCTCTTTCAGGGTCAGATTGATGACTACAGTTGA 1053 0.4226 MFQRESHTRDYSLVKYFDLTIFLQESFDIPRGHGGGDIELGAYVRTSGELGLDGFFKKVQDLDKEFEKLGRLLRKLQDAHEESKAVTKAPAMKDIRQRMDKDVDEVKKTAHYIKTRIEELDKDNLANRQKRGCGKGSGIDRSRTATTIAIKKKLKDKMDEFQTLREAIHQEYREVVERRVFTVTGTRADEETIDRLIETGDSEQIFQKAIKEQGRGQIIDTLAEIHERHEAARDVERKLLDLQQIYLDLAVLVEAQGDILNNIESQVSSAVDHVQQGNNALLKAKKAQKSSRKWMCIAIIILLIVIVVVLASVIKPWGDKRGAYTFSVLVYLGVTDDPEKLFQGQIDDYS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1668 350 FunFam Syntaxin 132 47 176 - -
Dere02g1668 350 PANTHER SYNTAXIN 56 302 IPR045242 -
Dere02g1668 350 CDD SynN 52 209 IPR006011 GO:0016020
Dere02g1668 350 SUPERFAMILY t-snare proteins 51 277 IPR010989 GO:0016020|GO:0016192
Dere02g1668 350 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 222 284 IPR000727 -
Dere02g1668 350 CDD SNARE_syntaxin1-like 221 283 - -
Dere02g1668 350 Gene3D - 216 315 - -
Dere02g1668 350 SMART tSNARE_6 217 284 IPR000727 -
Dere02g1668 350 Pfam Syntaxin 55 257 IPR006011 GO:0016020
Dere02g1668 350 Coils Coil 151 171 - -
Dere02g1668 350 Gene3D - 50 176 - -
Dere02g1668 350 SMART SynN_4 47 173 IPR006011 GO:0016020
Dere02g1668 350 Pfam SNARE domain 259 310 IPR000727 -
Dere02g1668 350 Coils Coil 59 82 - -
Dere02g1668 350 FunFam Syntaxin 132 215 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1668 Dere-ChrDere02 16601494 16606987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1668 28 323 SNARE and Associated Proteins AT3G03800 70.608 5.69e-146 412