LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere02g1642	ATGCCTAAAAGTGAAGTGAGAGAAAGCTATGGCTTACCGGTCCCAGAAAGCGAAAGTCTACGTTACAGTCTGAGACACAGACGCAGACAATACTGTAGTGTAACGTCGGTTTGTGTGGTAGTCCAGCGTGTGAATTTTGGCCCTTTCATTTCCTTGCGCCTCGTGTCAACAATTTGTCTTGGTGTGGGCAGAGAAAATCTGGCACCTAGGAAAATGGTTTCTATGCCTCATTTTTCACCTTTTCCAATCTGGCAACTGTTGCAGGACTTCTGTTCGTGGTCCTGGAAAACCAGGCTTTTTATCTCAAGAGCACTTTCTAGTATACGGAGAAAGACTTCTGTTTCAATGGCAAAACAATTCCACCCTTCATTGCCTCTGCTTTTGGTAACAACTTTACTTTCTATCTATCACTCGGAGCAGCTTCAATCCTCCCAGTTTGAGACCCTTTTGAGAATTCAACGAGATTTAAACTTTCCTGCTGCTTTAAGCAGCTGGAATAACCACGCAGATTTCTGCAACGCCGATTCAAATTCTTCTCTTACTGTCGTGTGCTATGAAGACACTGTAACCCAGCTTCATATAATAGGTGAAACAAGAACTTCCCGTCTTCCACGAAATTTCTCAATAGATTCCTTTGTCACAACACTGGCAAGACTTCCCAATTTGAAAGTCCTCACTCTGGTTTCTCTTGGTATATGGGGTCCATTGCCTGCTAAAATTTCTCATTTGGCGTCACTGGAAATAATTAACATGAGCTCTAATTTCCTGAATGGGACCATCCCACAAGAGCTTTCTTCATTATCCAATCTTCAAACACTCATTCTTGATGGGAACATGTTCGTCGGTGTGATTCCTATTTGGATAGGTTCATTTCCAACCTTAACTGTGTTGAGTTTGAAAAACAATAGGTTAAATGGGTCTTTGCCTGATTCATTGGGTAGCATGGAAAATCTGAGGATTCTTTCACTTTCTCATAATCACTTTCACGGAGTGGTACCTGATTTGAGCCGTTTGACTAATCTTCAGGTGCTGGAATTGGATTGTAATGCTTTTGGACCTCAGTTTCCTCGACTTGGTACCAAGTTGGTCACTCTTGTACTAAGAAACAATAGCTTCAGGTCTGGTATTCCTTCTGATGTGACCTCTTATTACCAACTTGAGCGATTGGATATTTCATCAAATACATTTGTGGGGCCATTTCAGCCAGCACTGTTATCTCTTCCTTCTATTACTTATCTCAACATTTCTGGGAACAAATTAACTGGGATGGTCTTTGAGAATATGTCTTGCAATTCAGAACTCGGAGTTGTGGATTTGTCCTCAAATCTTTTGACAGGCAGATTACCGAAATGTTTAGTGTCGAATTCCACTGGTAGGACAGTCCTGTATGCTAGAAACTGTCTAGATGGTGCAGATCAGAATCAGAACCCCTCACCCTTTTGCCACACTGAGGCCTTAGCCGTGGGGATATTACCTGAGAGAAAGAAGCACAAAGAATTGTCTAAGTTACTCCTTTCCATTGGAATAGCCGGTGGGACTATTGGGGGAGTAGCATTTGTTGGGCTAATTCTCTTTGTTATAAAAAGAGGAAATGCCAAAAGTAGAATTAGGAATCCTCCAACAAGATTTATATCTGAGAATGCTGCTTCTGGATACACCTCTAAGTTGCTTTCCAATGCAAGGTATATCTCTCAAACAATGAAGATGGGAGCAGTTGGCCTGCCAACTTATCGAACTTTCTCACTGGAGGAGATCGAGGCTGCTACAAACAATTTTGACACAGCTTTTTTCATAGGTGAAAGTTCTCATGGGCAGATGTATAGAGGCCAATTGAAGAATGGTTCGCTTGTTGCCATTAAATGTGTGAAAATAAAAAAAGGCTACAGCACACAAAACTTCATGCAGCATGTAGAGCTGATATCAAAACTCAGACATCGTCATTTAGCCAGTGCTCTTGGACACTGCTTTGAATGTTATTTAGATGATTCAAGTGTCAACAGAATATTTCTTGTCTTCGAATACGTACCAAATGGCACACTCAGGAGCTGGATCTCTGATGAGAATCCTACAAAATCACTTGGTTGGACTCAACGCATAGCAGCTGCTATTGGAGTAGCAAAGGGAATCCAATTTTTGCATACTGGGATTCTCCCTGGTGTATATTCAAACAATCTCAGAATAACAGATGTTCTATTAGACCAAAACCTCGTTGCAAAACTCAGCAGCTATAACCTGCCTTTGTTATCCAACATTGGAAAGGTTGGACATGGAAATTCTTCCAGTAAATCCAGAAGTCCTAAAGTTAACAAAAGTGAAAAACATGCCGATAAATCTGATATATACGATTTTGGAGTGATACTATTGGAAATCATCCTTGGAAGGACAATGAAGTCAACTAATGATGCGGACGCTTTAAAGAATCTGGTGCAAGCAAGCACAGTGGCTGATAATGATGCCCGGAGGAGCGTTGTAGATCCGGCAGTTCGCAAGACATGCTTGGATCAATCATTGAAGACAATGATGGAGATTTGCGTGAGGTGTCTGGTTAAAGAGGCAGAAGATAGGCCTTCCATTGAGGATATCTTGTGGAATTTACAGTTTGCTGCTCAAGTTCAAGATGCATGGCGAGTGGACTCTATGAGTAGTGGTGAGGGGTCTCCAGGCTCGCCATTAGACCCTCCAAGACTGGCCTTCCATTAG	2700	0.4189	MPKSEVRESYGLPVPESESLRYSLRHRRRQYCSVTSVCVVVQRVNFGPFISLRLVSTICLGVGRENLAPRKMVSMPHFSPFPIWQLLQDFCSWSWKTRLFISRALSSIRRKTSVSMAKQFHPSLPLLLVTTLLSIYHSEQLQSSQFETLLRIQRDLNFPAALSSWNNHADFCNADSNSSLTVVCYEDTVTQLHIIGETRTSRLPRNFSIDSFVTTLARLPNLKVLTLVSLGIWGPLPAKISHLASLEIINMSSNFLNGTIPQELSSLSNLQTLILDGNMFVGVIPIWIGSFPTLTVLSLKNNRLNGSLPDSLGSMENLRILSLSHNHFHGVVPDLSRLTNLQVLELDCNAFGPQFPRLGTKLVTLVLRNNSFRSGIPSDVTSYYQLERLDISSNTFVGPFQPALLSLPSITYLNISGNKLTGMVFENMSCNSELGVVDLSSNLLTGRLPKCLVSNSTGRTVLYARNCLDGADQNQNPSPFCHTEALAVGILPERKKHKELSKLLLSIGIAGGTIGGVAFVGLILFVIKRGNAKSRIRNPPTRFISENAASGYTSKLLSNARYISQTMKMGAVGLPTYRTFSLEEIEAATNNFDTAFFIGESSHGQMYRGQLKNGSLVAIKCVKIKKGYSTQNFMQHVELISKLRHRHLASALGHCFECYLDDSSVNRIFLVFEYVPNGTLRSWISDENPTKSLGWTQRIAAAIGVAKGIQFLHTGILPGVYSNNLRITDVLLDQNLVAKLSSYNLPLLSNIGKVGHGNSSSKSRSPKVNKSEKHADKSDIYDFGVILLEIILGRTMKSTNDADALKNLVQASTVADNDARRSVVDPAVRKTCLDQSLKTMMEICVRCLVKEAEDRPSIEDILWNLQFAAQVQDAWRVDSMSSGEGSPGSPLDPPRLAFH	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere02g1642	899	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	200	865	-	-
	Dere02g1642	899	MobiDBLite	consensus disorder prediction	878	899	-	-
	Dere02g1642	899	ProSiteProfiles	Leucine-rich repeat profile.	317	339	IPR001611	GO:0005515
	Dere02g1642	899	Pfam	Leucine rich repeat	268	328	IPR001611	GO:0005515
	Dere02g1642	899	SUPERFAMILY	L domain-like	71	468	-	-
	Dere02g1642	899	Gene3D	Transferase(Phosphotransferase) domain 1	675	881	-	-
	Dere02g1642	899	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase isoform A	360	477	-	-
	Dere02g1642	899	Gene3D	Ribonuclease Inhibitor	357	469	IPR032675	-
	Dere02g1642	899	Gene3D	Phosphorylase Kinase; domain 1	553	674	-	-
	Dere02g1642	899	Pfam	Protein tyrosine and serine/threonine kinase	598	863	IPR001245	GO:0004672\|GO:0006468
	Dere02g1642	899	ProSiteProfiles	Protein kinase domain profile.	592	867	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere02g1642	899	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	565	674	-	-
	Dere02g1642	899	SUPERFAMILY	Protein kinase-like (PK-like)	574	867	IPR011009	-
	Dere02g1642	899	Gene3D	Ribonuclease Inhibitor	142	356	IPR032675	-
	Dere02g1642	899	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	675	881	-	-
	Dere02g1642	899	FunFam	Putative inactive leucine-rich repeat receptor-like protein kinase	142	359	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere02g1642	Dere-ChrDere02	16120166	16125116	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere02g1642	158	894	Miscellaneous Gene Families	AT3G03770	62.097	0.0	888

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VI-1	Dere02g1642		PK_Tyr_Ser-Thr	6.9e-24	CL0016