Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1620 ATGATCGTTTCGTCAGAGGTTGTGATGCATCCATTTATAGACTCCACTGGGAATGAAAGAGCAGAAAAAGACAACAGTGCAAATGAGAGCATACGAGGATACGATCTGATTGATGAGACCAAGGAAGGCCTCCAACCTGCATGTCCCTCAACAGATCAGACATGTCTGCTTTCGAGCTCCAGGGGGAAACCTGATCCTACAATGGACCCTGCTTTGGACGTTGAGGTGGTTAAGTTGTGTGATTTTACTTCGGGGAAGGATGAGCCAGCTGCGTTTTTGGACCAAAACACATCTTTTGTGTTTGATAAGCAGATCCTTCTGAAGAGAGGCATACTGCAGATCGACCGGCAACTCGCTATGGACAAATCTACGAGTGGTTTCGTCTCTGGTTTTGCATTAAATGGTGACAAATTCGACAAGAGATTCGCGGATGCATTGATAAAATGGGGAATGTTGAAATTCTGCTTGGAAGTGCTGGAGAAGTTAGGAAGAATTGCAGGGTTTTCAATAAACGCAATTAGAGGAATATACTAA 534 0.4419 MIVSSEVVMHPFIDSTGNERAEKDNSANESIRGYDLIDETKEGLQPACPSTDQTCLLSSSRGKPDPTMDPALDVEVVKLCDFTSGKDEPAAFLDQNTSFVFDKQILLKRGILQIDRQLAMDKSTSGFVSGFALNGDKFDKRFADALIKWGMLKFCLEVLEKLGRIAGFSINAIRGIY 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1620 177 Gene3D - 8 53 - -
Dere02g1620 177 ProSiteProfiles Plant heme peroxidase family profile. 55 174 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere02g1620 177 SUPERFAMILY Heme-dependent peroxidases 13 153 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere02g1620 177 Gene3D Peroxidase, domain 2 55 149 - -
Dere02g1620 177 PANTHER - 60 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1620 Dere-ChrDere02 15915634 15916509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1620 65 153 Peroxidase AT4G26010 45.161 6.55e-19 80.5