Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1619 ATGGAGGATCAGGGTCAGGACCCCAATAGTGTAAGCCATACTTCCGAGAGATCAAGCGAAGGAGTGACAGTATCAGTGAGGTCAAGATGGACTCCCAAGCCGGAGCAAATCCTCATACTCGAGTCCATCTTCAACAGTGGCATGGTCAACCCCCCAAAGGATGAGACCGTCAGAATCAGAAAGCTTCTCGAGAAATTCGGTGCCGTCGGGGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGCAGGCCGCCTCCGCCGCCCTTCACCCTCATCAGCTTGGCGGTGCAACTCCTTCTCCATATGATCAAACTCAGAGCAGCTCTTCTGCTGCCTCTGCAGCTATGGTGGGTTATCATGGCGGTTGTTCGTCATCTTATCTCGCTGCCCAAGAACCGCCAGACGCTCTCTATTCATTCTCTGCTGATCACATGGGGTTCACTGATGCTGATCATGCTCCTGATTTGAACTTCCACACTGGATACATCACAGTGTTTATCAATGGGGTTGCAACAGAAGTTCCAAGGGGGCTCTTGGACATCAAAACCATGTTTGGTCAAGATCTGATGTTAGTTCATTCCTCTGGAATTCCAATTCCTACCAATGAGTTTGGCTTCTTGATCCAGGATTTGCAGCATGGTGAAAGCTACTTTTTGGTTTCAAAGCCAACATGA 708 0.5113 MEDQGQDPNSVSHTSERSSEGVTVSVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQQAASAALHPHQLGGATPSPYDQTQSSSSAASAAMVGYHGGCSSSYLAAQEPPDALYSFSADHMGFTDADHAPDLNFHTGYITVFINGVATEVPRGLLDIKTMFGQDLMLVHSSGIPIPTNEFGFLIQDLQHGESYFLVSKPT 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1619 235 ProSiteProfiles 'Homeobox' domain profile. 23 88 IPR001356 GO:0003677
Dere02g1619 235 Pfam Homeodomain 27 87 IPR001356 GO:0003677
Dere02g1619 235 MobiDBLite consensus disorder prediction 86 120 - -
Dere02g1619 235 FunFam WUSCHEL-related homeobox 11 27 94 - -
Dere02g1619 235 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 234 IPR044558 GO:0003700|GO:0048830
Dere02g1619 235 SMART HOX_1 25 92 IPR001356 GO:0003677
Dere02g1619 235 SUPERFAMILY Homeodomain-like 27 95 IPR009057 -
Dere02g1619 235 Gene3D - 27 95 - -
Dere02g1619 235 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1619 Dere-ChrDere02 15908389 15910443 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1619 3 231 Wox Gene Family AT3G03660 51.661 6.90e-62 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere02g1619 Homeodomain 8.4e-13 CL0123