Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1614 ATGCACAGAAGAGCAAGGCCAAGGATGGGAGCAATAAAGCAGTTCTATCTTACAAGCTTTTCTCATATGTTTGTTAGGACAATAGCTGCTGCTACCAATGGAATCACTGTTCCTGTTACGAGTATAATTCTCAGAGATGTCTTCGATGCATTGGGAAGAAACAGTGACTCCAAAAAGATTGTTCATGATGTTTCAAAGGTAGGAAAGTTTATAGAGCATGTGGCAACGTTTATGGGAGGAGTAATTATAGCATTTTCCAAGGGTTGGCTTTTAACCCTTGTCCTGTTATCTGTTGTTCCATTTCTTGTCCTTGCCAGTGCCATGATAAGCTTCGCAATAGCAAAGATGGCATCTCGTGGGCAAGATTCTTATTCTAAATCAGCACGTGTGGTAGACTTAACCATTAAGGGAGTAGTTTCTGGTTTGGGTCTTGGTTTAGTTCATTTATTTATATACTGTGCTTATGCCTTGGCCGTATGGTATAGAGGTAAGATGGTACTAGAGAAAGGATATACAGGAAGGCAAGCCATGACTATCTATCTTGTAATATCAAGTGGCTTATTAGAGGCATATCCAAGCTTGACAGCATTTGCTATAGGACAAGCTGTGACCATTACAAAGTTTGAAATGATCGGGAAGGAACCAGATATTGATGTTTATGACACCTCTGGTCAGCAACTAGATGATATTCATGGAGACATAAAGTTAAAAAAGGTTCGCTTTAGTTATCCTACAAGACCAAATGAACTAGTATTTAAAGAATTTTCTTTTTCAATGCCAAATGGCACTACAACTGCTTTGGTAGGGCAAAACAAAATAGGTCTTGTTTGCCAGGAACCTGTTCTTTTTGCTTGTTGCATTAAAGAGAATATTGCTTACGTTGATCCCTTGGAAATTGTGAGTGGAGATTTTGAAGCTCCTTCTTCTATAGCATCACCTAACCCTGCCCAAGTCTTACTTCTCCCCCTTGCTTATCTTAACAAGCCTGAATTACCAGTGCTACTCATGGGTAATCTGGTTGCAGCAGTAAATGGATCAATATTACCTAGTATGGGGCTTTTGATATCTGTCATGCCAATAATGTCTTACTGTTTTGGTGTAGCTGGTTGTAATTTGATAAAAAGGGTTCGACTACTTTGTTTCGAGAGGGTTATTCATAAGGAAATAGGATGGTTTGATAACGTTAAGTGTTCAAGTGGAGCAATTGGGGCGAGGCTTGCTACTGATGCTACTTCTATTCGAGTTTTGGTAGGGGACGCACTAGCTTTGAGATTCAAAATATTATCACTGTAA 1293 0.3937 MHRRARPRMGAIKQFYLTSFSHMFVRTIAAATNGITVPVTSIILRDVFDALGRNSDSKKIVHDVSKVGKFIEHVATFMGGVIIAFSKGWLLTLVLLSVVPFLVLASAMISFAIAKMASRGQDSYSKSARVVDLTIKGVVSGLGLGLVHLFIYCAYALAVWYRGKMVLEKGYTGRQAMTIYLVISSGLLEAYPSLTAFAIGQAVTITKFEMIGKEPDIDVYDTSGQQLDDIHGDIKLKKVRFSYPTRPNELVFKEFSFSMPNGTTTALVGQNKIGLVCQEPVLFACCIKENIAYVDPLEIVSGDFEAPSSIASPNPAQVLLLPLAYLNKPELPVLLMGNLVAAVNGSILPSMGLLISVMPIMSYCFGVAGCNLIKRVRLLCFERVIHKEIGWFDNVKCSSGAIGARLATDATSIRVLVGDALALRFKILSL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1614 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 226 298 IPR027417 -
Dere02g1614 430 Gene3D ABC transporter type 1, transmembrane domain 303 429 IPR036640 GO:0005524|GO:0016020
Dere02g1614 430 Gene3D ABC transporter type 1, transmembrane domain 137 223 IPR036640 GO:0005524|GO:0016020
Dere02g1614 430 Gene3D ABC transporter type 1, transmembrane domain 64 136 IPR036640 GO:0005524|GO:0016020
Dere02g1614 430 PANTHER ABC TRANSPORTER B FAMILY 65 136 IPR039421 -
Dere02g1614 430 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 363 430 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1614 430 SUPERFAMILY ABC transporter transmembrane region 355 422 IPR036640 GO:0005524|GO:0016020
Dere02g1614 430 Gene3D - 224 270 IPR027417 -
Dere02g1614 430 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 54 138 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1614 430 SUPERFAMILY ABC transporter transmembrane region 60 183 IPR036640 GO:0005524|GO:0016020
Dere02g1614 430 Pfam ABC transporter transmembrane region 66 137 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Dere02g1614 430 Pfam ABC transporter transmembrane region 357 425 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1614 Dere-ChrDere02 15832452 15837089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1614 323 423 Calmodulin-binding Proteins AT2G36910 26.667 2.09e-08 54.7