Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1607 ATGGGAAGCAGAAAGGAAGATGAGAGAAATGAGAAGATTATCAGAGGTCTTATGAAGCTTCCGCCAAATCGAAGATGTATCAACTGCAACAGTCTGGGTCCGCAATATGTCTGTACGAATTTTTGGACCTTCCTTTGCATGACATGCAGTGGGATACATCGTGAGTTTACTCATCGTGTGAAGTCTGTATCGATGGCGAAGTTCACTTCTCAGGAAGTAGAAGCCCTTCAAAATGGTGGCAACCAGCGGGCAAGGGACATATATTTGAAAGATTGGGACTTCCAAAGGCAGCGGTTGCCAGATAGCAGCAATGTTGATAAAATAAGGGAGTTTATAAGGACTGTATACATCGATAGAAGATATGCTGGAGCAAAGTCCTGTGACAAGCCTCCAAGAGATATGCAGAGCCCTAGAATCCATGGAGATGAGACAAGGCGCGCCAGTTCTTATCATTCATATTCTCAAAGTCCTCCGTATGATTATCAATATGAAGATCGACGGTATGGAAAACAAGCAGCTGCATTGACCAGGAAGCCAGGTTCAGATAAAGGCCGCTATGAAGGGAAGATGTCTAGTATTATTTATAGTCCTGGTCGCTTTAGTGATCATGCATCTGAGGACAGGTTTGCGAATGAGGGATCTGGTCCAAGAATTTCAGACTATTCTGTGTCTAGTGCAGGCGAACAATTCAAATCTACCGTGCAGTCTCCTAAGTTTTATAAAGATGTTGCACATAGCACTCCATTCCATCAGCGTTCAAGTGCTGATTCAAGTGAAGATGTTTGGTCTCGACCAAGGTTTATGTCTCTGGAAACAATTGTCAAAGGAGATGCAGATGGACATCATCCACAGAGAACTACATCATTGGGATCATCAGACAGCAATCCAATGTCATTTAGGTCTTTCAGTTCTGGTGGTTTAGTTGATGTTTTTTCAGAACCTGTCCAAACTTCTGGACCCAATCAAGATAAAGTGTCTGCCATGCCACAACAATCTTGTCCAGCAAGGTCTGTTAGCTTGGATCTTTCAAAGGCACCAGTGGCATCTGAGGCATCAACGCCATCTATTGATCTCTTTGAGTTTCCAGCATCCTCTCAGTCTCCATCAGTGGATTTGTTTCAACCATCTATTTTGTCTTCAACACCATCTTCGAATGAAAATCAACCTTCACAGACAACCCAGCCCTCACCTATTGACTTCTTTGCAGATGTTCCTCAGCAGCAGTCGGCTGCTATCGCAGATGAGAAGTCACCTGAGTTCTTTGTCCCTAAAAATGAAGGATGGGCAACATTTGACATGCCTCAGCGCGCATCATCTACTGTACAAGATGAAATTCCTGCAGGAGTACTTTCAACTGATAGGTCTTTGCTGGAAGTATTTGATCCATTTTTGACTGTAAATGCTAGCATGCAGTGGCCATCTTTTGAAACTTCCAGTGTTCATGAACCTTCAATTACTTCTAATCCATGGCATGGTGGTGTGCAGAATGGAGAACAAGCATCTGTTACTGCAGCAAATACTCAACCATGGAATGCATTTGAAGATCCTGGTTCCCACCTTCCTGTAGATGCTGTTAATCAAGGATTGCAACTGCATAATCTGCCATCAAAGGATGATAAATTTTTGGGCTCAAGAGTTTCAGAGGGCCCTACTGAAGGTGGGATGCAGGGCTTTGCTCCTGTCAGTGAATTTAATGATCATAATATTCCATCACATGTCAGTCGTTCACCATATCCTCCGTCTGTACTTCCCGTGATGGGAGAGACTCAACATATTGCAACCAACCAGAAATCAACTAATCCATTTGATCTACCCTATGAATCTGATCTAGAGCACAACAATATGTTCCTTGATATGAGCTCCTTGCAAGCTGCTCTGCCAGATGCCCAGTTGGCATCCCATTTCCATGGTGGTATACCTGAACCATGGCTCCCTCAAAATATGACCCCTTATATACCATCTGCAGGACAAGGTGGTCTAACATTAATGGCTGCTCAACCGCCAAGTTCTCAAATACCGAACGTCCAGACGCAGGGACCAGTTGCTTCTTGTGGGGGAAATCCGTTTGCATAG 2073 0.4395 MGSRKEDERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTNFWTFLCMTCSGIHREFTHRVKSVSMAKFTSQEVEALQNGGNQRARDIYLKDWDFQRQRLPDSSNVDKIREFIRTVYIDRRYAGAKSCDKPPRDMQSPRIHGDETRRASSYHSYSQSPPYDYQYEDRRYGKQAAALTRKPGSDKGRYEGKMSSIIYSPGRFSDHASEDRFANEGSGPRISDYSVSSAGEQFKSTVQSPKFYKDVAHSTPFHQRSSADSSEDVWSRPRFMSLETIVKGDADGHHPQRTTSLGSSDSNPMSFRSFSSGGLVDVFSEPVQTSGPNQDKVSAMPQQSCPARSVSLDLSKAPVASEASTPSIDLFEFPASSQSPSVDLFQPSILSSTPSSNENQPSQTTQPSPIDFFADVPQQQSAAIADEKSPEFFVPKNEGWATFDMPQRASSTVQDEIPAGVLSTDRSLLEVFDPFLTVNASMQWPSFETSSVHEPSITSNPWHGGVQNGEQASVTAANTQPWNAFEDPGSHLPVDAVNQGLQLHNLPSKDDKFLGSRVSEGPTEGGMQGFAPVSEFNDHNIPSHVSRSPYPPSVLPVMGETQHIATNQKSTNPFDLPYESDLEHNNMFLDMSSLQAALPDAQLASHFHGGIPEPWLPQNMTPYIPSAGQGGLTLMAAQPPSSQIPNVQTQGPVASCGGNPFA 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1607 690 MobiDBLite consensus disorder prediction 274 298 - -
Dere02g1607 690 PANTHER ARFGAP/RECO-RELATED 1 690 IPR044820 GO:0005096
Dere02g1607 690 MobiDBLite consensus disorder prediction 125 161 - -
Dere02g1607 690 Pfam Putative GTPase activating protein for Arf 12 122 IPR001164 GO:0005096
Dere02g1607 690 CDD ArfGap_AGFG 11 121 - -
Dere02g1607 690 Gene3D Arf GTPase activating protein 2 130 IPR038508 -
Dere02g1607 690 MobiDBLite consensus disorder prediction 310 332 - -
Dere02g1607 690 MobiDBLite consensus disorder prediction 125 147 - -
Dere02g1607 690 FunFam Arf-GAP domain and FG repeat-containing protein 1 1 134 - -
Dere02g1607 690 SMART arf_gap_3 11 129 IPR001164 GO:0005096
Dere02g1607 690 SUPERFAMILY ArfGap/RecO-like zinc finger 9 122 IPR037278 -
Dere02g1607 690 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Dere02g1607 690 PRINTS HIV Rev interacting protein signature 60 81 IPR001164 GO:0005096
Dere02g1607 690 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Dere02g1607 690 MobiDBLite consensus disorder prediction 370 399 - -
Dere02g1607 690 MobiDBLite consensus disorder prediction 284 298 - -
Dere02g1607 690 MobiDBLite consensus disorder prediction 667 683 - -
Dere02g1607 690 MobiDBLite consensus disorder prediction 667 690 - -
Dere02g1607 690 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 129 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1607 Dere-ChrDere02 15750546 15757859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1607 14 116 C2H2 Transcription Factor Family AT4G05330 33.333 1.48e-11 64.7