Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1600 ATGGATCATTACAAGATTCTAGGGTTGCAGAGAAACGCTACCAAGGAAGAAATCAAAGCGGCATTCAAGAAATTGGCCTTTCAATTCCACCCCGACAAGCATTCGCAATCGTCCCAGGCTGTCAGAGACAACGCGACTCGTAGATTCAAGCAGGTCTCTGAGGCTTATGAGGTGCTCATGGATGATCGTAAGCGTGCGGACTACAATGTACGATCACGGGCTGGCACTAGTAGAAGTGGGTTCTCTGCTGGTGAGAGTAGCGGTTACAACTATTTTTATTATTATAGTTATAATTATGGTGGGAATAGGAGCAGTTACAATTACAAACCTAGATATAAATCGGGCTCTGGCCTTGGTGTTGACGGCATCGCGTCCAAGCTTGTGCTTGCTCTTCGGTTTCTGACTACACGAGCTTTTCTTCTCAATCTTGGCTTCGCAGGAGCTTTCTTAGGTGGGATTGTTGTTATTGATTCAAGCCGAGAAGCCATATGGAAGATGCAAAACTCCGGGAAATCATTTGAAGAAGCGATGGAGTCCATTGAGAAAGCCAAAGCTGAGAAAAGATGA 567 0.4533 MDHYKILGLQRNATKEEIKAAFKKLAFQFHPDKHSQSSQAVRDNATRRFKQVSEAYEVLMDDRKRADYNVRSRAGTSRSGFSAGESSGYNYFYYYSYNYGGNRSSYNYKPRYKSGSGLGVDGIASKLVLALRFLTTRAFLLNLGFAGAFLGGIVVIDSSREAIWKMQNSGKSFEEAMESIEKAKAEKR 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1600 188 Pfam DnaJ domain 2 69 IPR001623 -
Dere02g1600 188 CDD DnaJ 2 61 IPR001623 -
Dere02g1600 188 SUPERFAMILY Chaperone J-domain 1 94 IPR036869 -
Dere02g1600 188 PRINTS DnaJ domain signature 64 83 IPR001623 -
Dere02g1600 188 PRINTS DnaJ domain signature 4 22 IPR001623 -
Dere02g1600 188 PRINTS DnaJ domain signature 44 64 IPR001623 -
Dere02g1600 188 PRINTS DnaJ domain signature 22 37 IPR001623 -
Dere02g1600 188 FunFam DnaJ domain protein 1 89 - -
Dere02g1600 188 PANTHER CO-CHAPERONE PROTEIN DJLA 4 116 - -
Dere02g1600 188 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Dere02g1600 188 SMART dnaj_3 1 64 IPR001623 -
Dere02g1600 188 Coils Coil 173 188 - -
Dere02g1600 188 Gene3D DnaJ domain 1 88 IPR036869 -
Dere02g1600 188 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1600 Dere-ChrDere02 15656208 15661362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1600 3 69 C2H2 Transcription Factor Family AT1G74250 37.313 8.15e-11 58.5