Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1597 ATGAAAACAGATTTGGGTGATTCAGTCAAGGCTGATGCAAGTTTTGGTTTATGTGAGAATGAAAGAGGTTCTACTGCTAAGGAAAATAGAGCATTGGTAAGACATACTAATTTGCATTCTTTTGATATAATTTCTCTATCAGTTGACTTTGACTTGTTTGGGCTTTTTACAAGAAACAACGAAAGGAAAGATGTGAAATTTACATCCTTACACTATGCCTCATTTATCATTATTACAATTGAGGATATTGCTTACAATGTGAGGCTAAAGATAACGAAGAAGGGTGGGGGATACTTTAATGCAATGGCAGTCTTTGGGAGCTCCACGCCATTGTGTCCTAGCAATCAGCATTGCTCGCAATGGGTTGAAAAGCATATGAGTGTTTGTCTCTGCAGTGCTAAGGACACAATTTCCTACACGTTAGGTATGATCAGTATCGTTACTTGGGTTGTTGCTGAGATACCGCAATTAATCACGAACTGCAGAAACAAATCTACTGAGGGCCTCTCTGCTTCTTTCTTGACGACATGGCTGATCGGAGATCTATTCAACCTCTTCGGCTGCATACTAGAACCTGCTACTCTGTATACCTTTATAACTGTTGCACTTGTTTTACAAACCATATACTACGGATACATATATCCTCGACTCAAATGCAATAGACAGAACAAGGTTGAGACCCCAAAAGCCGGACAAAGCAATAGTGGAGGTAAAAATATCAATAATGCTGACCGGCGTAATGGGACTGATGCCTTCAACACAGTCAGCGGTTACAGTTCTCCTATTCCTCTTCCAGCCCTTCCTCGGATTTTGACTGGAAGAGAATTATACTACCAGTCGGCAAGATCTCTATCAAAGAGTCATACTCCGACAGCGGGATCTGTCTTAGCCCAGAGAATGACACCTACATCTCAAATTTTGGATTCTGTAGAGGAGCCCTTGCTTGCTTCAACTGTTTCACCACAGTCTGCACCAGCTTTGAAGATAAAAAATAGTCTATGTTTGGTATCTACATTCACTTTACTTGGTGCGTTAAATCTGCTTCAATCACCTGACAGAAGACCTAATTCCATGGTCATAACACCAAGACACGAGTTTGTGATGCTAGTTGGACGAAAGCTTCTGCAGGCTAGTGGAGTTCAGTTGCCAGAACATGGCCCGGAAGGGAGCGCACGCATTGGGGCTTTACTTGGTTGGGCAATGGCAGCTATATACATGGGTGGAAGACTACCTCAGATTTTTTTGAATGGCCTCAATCCTTTAATGTTTCTCTTTGCCTTAATTGGGAACGCCACTTACGTAGGAAGGTATGCTGCTGGTTTATATTATCTTCTTTGTTTGAAGTATTAG 1350 0.417 MKTDLGDSVKADASFGLCENERGSTAKENRALVRHTNLHSFDIISLSVDFDLFGLFTRNNERKDVKFTSLHYASFIIITIEDIAYNVRLKITKKGGGYFNAMAVFGSSTPLCPSNQHCSQWVEKHMSVCLCSAKDTISYTLGMISIVTWVVAEIPQLITNCRNKSTEGLSASFLTTWLIGDLFNLFGCILEPATLYTFITVALVLQTIYYGYIYPRLKCNRQNKVETPKAGQSNSGGKNINNADRRNGTDAFNTVSGYSSPIPLPALPRILTGRELYYQSARSLSKSHTPTAGSVLAQRMTPTSQILDSVEEPLLASTVSPQSAPALKIKNSLCLVSTFTLLGALNLLQSPDRRPNSMVITPRHEFVMLVGRKLLQASGVQLPEHGPEGSARIGALLGWAMAAIYMGGRLPQIFLNGLNPLMFLFALIGNATYVGRYAAGLYYLLCLKY 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1597 449 Pfam PQ loop repeat 137 192 IPR006603 -
Dere02g1597 449 ProSiteProfiles NAF domain profile. 33 57 IPR018451 GO:0007165
Dere02g1597 449 Pfam NAF domain 37 93 IPR004041 GO:0007165
Dere02g1597 449 MobiDBLite consensus disorder prediction 226 246 - -
Dere02g1597 449 Gene3D - 137 227 - -
Dere02g1597 449 PANTHER SEVEN TRANSMEMBRANE PROTEIN 1-RELATED 110 435 - -
Dere02g1597 449 SMART ctns 407 431 IPR006603 -
Dere02g1597 449 SMART ctns 151 182 IPR006603 -
Dere02g1597 449 Gene3D Kinase associated domain 1, KA1 34 123 - -
Dere02g1597 449 FunFam PQ loop repeat family protein 138 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1597 Dere-ChrDere02 15635416 15643023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1597 16 99 CBL-interacting serine-threonine protein kinases AT5G58380 40.476 4.09e-10 59.7