Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1567 ATGGAACGCAGTATCGGTCAAGACTCTAATCCAGCTCATGGATCCTTTGATAAGTCCAGGGTTTTGAATGTTAAGCCATTGCGAACTCTTGTTCCTCTATTCCCTTCACCATCTAACGCATCTACGTCTTTAAATTCCCAAGGTGGGGCACCCTTTGTTTCGGTCTCTCCGTCCGGTCCTTTCCCACCTGGGGTTTCCCCCTTCTACCCATTCTTCTTCTCTCCAGAGTCCCAGAGGCTTTCTGAACAAAATCTTCAAACCCCAGCAGCTGGTGTGCCTGCAGTTCCACTTAATTCGTTTAGGACACCAACACCAAAAGCTAAGGCTACAACTAATGGAGTTGTGAGGTCATCACGAAGAAGCAATAGGGGTTTCACGGACGATGATGGCTATAGTAATAGCCAAACTCAAATCACTTTTGAGGTGAATGAAACAGATGCAGAAGATGGAAGTCAGGGGAGGCTCAGGTCACGGAAGAAGAAAACGGGAAGGCAGGGAGGCTCTGCATCAGTTGAAGTCGATGTGGATGCTGTGGCTAATGATATTCTCAAGTCAGTTAATCCTATAATTTTTGATGTCTTAAATCAACCTGATGGTAGCAAAGACTCAGTTTCATATACACTCATGATATTTGAAGTGCTAAGAAGGAAGATCACGCAAATTGAAGATTTAAAGGAAGGAAATCCTGGAGTGGCAAGGCGGCCTGATTTAAGGGCAGGTACAATTATGTTGAGTAAAGGGGTTCGAACAAATAGTAAGAAACGAATTGGAGCTGTGCCTGGTGTTGAAGTTGGGGATATTTTCTTTTTCAGGATGGAATTGTGTGTGGTGGGGCTGCACTCACCATCTATGGCTGGGATTGATTACTTGGGTGTCAAATTCAGTCAAGAAGAAGAGCCATTGGCTGTAAGTATTGTCTCATCTGGAGGATATGAAGATAATGCAGAGGATGGGGATGTGCTGATTTACAGTGGCCAAGGTGGGGCTAAGGGAGCGAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCATTGGAAAAGAGCCTGCATCGAGGTAATGAAGTCAGAGTAATTAGAGGTCTCAGGGACATGGCGACTCTTGGTGGGAAGATATATGTTTATGATGGCCTTTACAAGATCCAGGATTCATGGGTAGATAAAGGAAAGTCAGGTTTCAATGTATTTAAGTATAAATTGGTCAGGTTGCCTGGGCAGCCTGAAGCATATATGACATGGAAATCCATTCAACAATGGACTGAAAAGTCTACTTCTAGAGTTGGGGTTATATTGCCTGATCTTACATCTGGTGCAGAAAAGTTGCCTGTTTGTCTTGTGAATGATGTTGATAATGAGAAGGGCCCTGCATATTTCACCTACTGCCCTACTCTCAAGAATTTAAAGCCAACAAATCCCGTAGATCATTCTGCTGGATGTAATTGTGCTGGTGGATGCCTTCCTGGCAACTATAACTGTTCTTGTATTCAAAAGAATGGAGGCCATCTCCCATATTCTGTAAATGGGGTACTCTTGGACTTGAAATCTGTGATATATGAGTGCGGTCCTTCCTGTCAGTGTCCCCCTACTTGTCGAAATAGGGTTTCTCAAGGTGGCTTGAAAATTCGTTTGGAAGTGTTTAAAACTAAGAATAAAGGGTGGGGTTTAAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGTGAGTATGCTGGGGAGGTCATAGATAATGCTAGAATGGAGGAGCTTGGTGGTGAAAATGAAGATGATTACATTTTTGATTCTACCCGCATTTATCAGCAGCTGGAAGTTTTTCCTAGTGAAACGGAAGCTCCAAAGATCCCATATCCCCTCTATGTAACAGCAAGGAATGATGGGAATGTTGCTCGGTTTATGAACCATGGCTGCTCTCCGAATGTATTCTGGCGCCCAGTTGTGCGTGAAAACAAAAATGAGTCTGATCTCCACATAGCTTTCCATGCAGTCAGGCATATCCCTCCTATGACTGAGTTGACATATGATTATGGAATAGTTCTTCCTCTAAAAGCAGGGCAGAGGAAAAAGAAATGCATATGTGGATCAGCAAAATGTAGGGATTACTTTTGTTAA 2103 0.4341 MERSIGQDSNPAHGSFDKSRVLNVKPLRTLVPLFPSPSNASTSLNSQGGAPFVSVSPSGPFPPGVSPFYPFFFSPESQRLSEQNLQTPAAGVPAVPLNSFRTPTPKAKATTNGVVRSSRRSNRGFTDDDGYSNSQTQITFEVNETDAEDGSQGRLRSRKKKTGRQGGSASVEVDVDAVANDILKSVNPIIFDVLNQPDGSKDSVSYTLMIFEVLRRKITQIEDLKEGNPGVARRPDLRAGTIMLSKGVRTNSKKRIGAVPGVEVGDIFFFRMELCVVGLHSPSMAGIDYLGVKFSQEEEPLAVSIVSSGGYEDNAEDGDVLIYSGQGGAKGASDQKLERGNLALEKSLHRGNEVRVIRGLRDMATLGGKIYVYDGLYKIQDSWVDKGKSGFNVFKYKLVRLPGQPEAYMTWKSIQQWTEKSTSRVGVILPDLTSGAEKLPVCLVNDVDNEKGPAYFTYCPTLKNLKPTNPVDHSAGCNCAGGCLPGNYNCSCIQKNGGHLPYSVNGVLLDLKSVIYECGPSCQCPPTCRNRVSQGGLKIRLEVFKTKNKGWGLRSWDPIRAGAFICEYAGEVIDNARMEELGGENEDDYIFDSTRIYQQLEVFPSETEAPKIPYPLYVTARNDGNVARFMNHGCSPNVFWRPVVRENKNESDLHIAFHAVRHIPPMTELTYDYGIVLPLKAGQRKKKCICGSAKCRDYFC 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1567 700 ProSiteProfiles YDG domain profile. 257 400 IPR003105 -
Dere02g1567 700 SMART set_7 539 680 IPR001214 GO:0005515
Dere02g1567 700 MobiDBLite consensus disorder prediction 103 120 - -
Dere02g1567 700 ProSiteProfiles Pre-SET domain profile. 475 536 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g1567 700 Pfam SAD/SRA domain 256 404 IPR003105 -
Dere02g1567 700 MobiDBLite consensus disorder prediction 79 169 - -
Dere02g1567 700 SUPERFAMILY SET domain 415 680 IPR046341 -
Dere02g1567 700 SMART preset_2 429 523 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g1567 700 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 109 693 - -
Dere02g1567 700 ProSiteProfiles SET domain profile. 539 674 IPR001214 GO:0005515
Dere02g1567 700 SMART G9a_1 252 404 IPR003105 -
Dere02g1567 700 Pfam Pre-SET motif 433 531 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere02g1567 700 Gene3D - 240 422 IPR036987 -
Dere02g1567 700 MobiDBLite consensus disorder prediction 1 21 - -
Dere02g1567 700 SUPERFAMILY PUA domain-like 239 419 IPR015947 -
Dere02g1567 700 ProSiteProfiles Post-SET domain profile. 684 700 IPR003616 -
Dere02g1567 700 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 115 699 IPR025794 GO:0016571
Dere02g1567 700 MobiDBLite consensus disorder prediction 1 16 - -
Dere02g1567 700 MobiDBLite consensus disorder prediction 127 146 - -
Dere02g1567 700 Pfam SET domain 550 674 IPR001214 GO:0005515
Dere02g1567 700 Gene3D SET domain 423 699 IPR046341 -
Dere02g1567 700 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 240 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1567 Dere-ChrDere02 15419904 15422006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1567 10 699 Su(var)3-9 homologs AT1G73100 49.791 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere02g1567 SAD_SRA 3.1e-49 CL0178