Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1553 ATGTCAGAAAGAAAGAATGCAGACAGAAAGCTGAAGCGCAAGATGGAGGAGGAAGAGAGAGAGAATTTTCTGTCTCTGAGGCTATGCTGCGGAAGCAGCAGCAACAACAACAACGACAACAACGTTAACGTGTCGAAACCATTGAAGGTGGTATCGAGTTATGGATTACGTAAGAAAGCAGAAGAAGGGAGGGAGTTTGCATGCAAATATTGCAGAAAGAAGTTTAGTAGCTCACAGGCACTGGGAGGGCACCAGAATGCACACAAGAGGGAGAGAGTGCTTTGCAGGATGGAGAAGGATTTGGGTATGGCCACTTTTGGACGCCATTCTCACTTGTGCCATTGTTCATCATCCATCATCCCTCATAATAATAATAATAATAATAATCTTGGTCTTGCCTTTCCCTTTCGTAATAATTATCATACTCTTCATCATCACCACAATCACAATTACAATGGCATGCCTCATTCCAGTACGTGGAATTGGAGTCATGGCTATGCCCATCAAGGCCTACCCAAACCCAGTTTACCTTCTGGGATGAGCAGTTCATGGAATTCAAATATTGTGGAAAACAAGCGTGATTCGTCTTCAGGCCTCGACTTGTCTCTCAATCTCTGA 618 0.4385 MSERKNADRKLKRKMEEEERENFLSLRLCCGSSSNNNNDNNVNVSKPLKVVSSYGLRKKAEEGREFACKYCRKKFSSSQALGGHQNAHKRERVLCRMEKDLGMATFGRHSHLCHCSSSIIPHNNNNNNNLGLAFPFRNNYHTLHHHHNHNYNGMPHSSTWNWSHGYAHQGLPKPSLPSGMSSSWNSNIVENKRDSSSGLDLSLNL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1553 205 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 10 176 IPR044246 GO:0009788
Dere02g1553 205 SUPERFAMILY beta-beta-alpha zinc fingers 64 93 IPR036236 -
Dere02g1553 205 Coils Coil 1 21 - -
Dere02g1553 205 Gene3D Classic Zinc Finger 37 109 - -
Dere02g1553 205 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Dere02g1553 205 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 93 IPR013087 -
Dere02g1553 205 Pfam C2H2-type zinc finger 66 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1553 Dere-ChrDere02 15250643 15251260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1553 64 119 C2H2 Transcription Factor Family AT1G24625 51.786 4.24e-12 60.8