Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1550 ATGGAAGGGAATGGAAATGGATGTTTTGGGAGATTCTTTGAGAGGTGTAAGCCGTACATAGCTATGATTTCTCTGCAATTCGGGTACGCCGGTATGAACATTATCACTAAGGTTTCCCTCAACCGAGGGATGAGCCATTATGTGCTTGTCGTTTACAGACATGCCTTTGCCACTGCAGCTATTGCTCCCTTTGCTCTTGTTCTTGAGAGGAAAGTGAGACCCAAGATCACATTTCTCATGTTCCTGCAAATTTTCGTGCTGGGGCTTCTTGGGCCTGTGATTGATCAAAACTTGTACTACGCGGGGTTGAAATTTACTTCCCCAACCTACTCATGTGCTATAAGCAACATGCTCCCTGCAATGACATTTATTATGGCAGTTATTTTCAGGATGGAGAAGGTAGACATGAAAAAAGTACGATGCCAAGCGAAGGTGATTGGCACGATTGTTACAGTAGCTGGGGCCATGTTAATGACGCTGTACAAGGGGCAAGTCATCAACTTTTTCTGGTCTCACTACATGCATCACCCCAGAAACTATGCTCCTACTACGGCCACTGATTCTGGGGAAAAAGATTGGGTCAAGGGTTCTATTCTGCTCATAATTGCTACCCTTGCCTGGGCTTCTTTCTTCATCCTCCAGGCAGTGACGTTAAGGACGTACTCGGCTCAGCTCTCGCTCACATCACTAGTGTGTTTCATGGGAACACTGCAATCGATTGCTGTTACGTTTGTGATGGAACACAAAGCCTCTGTTTGGAGCATTGGGTGGGACCTGAACCTGCTGGCCGCAGCCTATGCCGGTATAGTATCATCAGGCATTGCGTACTATGTTCAAGGGATTGTAATGCAGAAAAGAGGGCCTGTTTTCGTGACCGCTTTCAGCCCTTTGATGATGATCATTGTAGCCATCATGGGCTCTTTCATCCTCGCGGAAAATATCTACCTTGGAGGAGTGATAGGGTCTATACTGATCGTGGTGGGTCTATACTCTGTTCTATGGGGAAAATACAAGGAGAAGATGGAGAAAGAGGCAGAGACAATCCCAGAGGCAATCAAGGGACGTACAGAGAATGGGATGGAAGATATTGAAGCGAACCTCACTGAGATACAAAGGGTTGAAACTAGCAAGGGATCAACAGCTCCTGCAGTAGCAGCCATCAGTGTTCCCAAAGCTTAA 1179 0.4648 MEGNGNGCFGRFFERCKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAIAPFALVLERKVRPKITFLMFLQIFVLGLLGPVIDQNLYYAGLKFTSPTYSCAISNMLPAMTFIMAVIFRMEKVDMKKVRCQAKVIGTIVTVAGAMLMTLYKGQVINFFWSHYMHHPRNYAPTTATDSGEKDWVKGSILLIIATLAWASFFILQAVTLRTYSAQLSLTSLVCFMGTLQSIAVTFVMEHKASVWSIGWDLNLLAAAYAGIVSSGIAYYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGSFILAENIYLGGVIGSILIVVGLYSVLWGKYKEKMEKEAETIPEAIKGRTENGMEDIEANLTEIQRVETSKGSTAPAVAAISVPKA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1550 392 PANTHER WAT1-RELATED PROTEIN 18 342 IPR030184 GO:0016020|GO:0022857
Dere02g1550 392 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020
Dere02g1550 392 Pfam EamA-like transporter family 19 159 IPR000620 GO:0016020
Dere02g1550 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 337 - -
Dere02g1550 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1550 Dere-ChrDere02 15212656 15214296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1550 12 390 Nodulin-like Gene Family AT5G07050 65.365 1.32e-177 498