Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1529 ATGGGATTCTTAGCTGATCTCAGTTGTCGAACTCGTTCACCATTTGGCAATTCGTGCGCGCTCTGTAATTGGGTCTGTGATTTGATGGGACTTTGTCATGGAAAACCTAATGAAATCCCACAAACGCAAGGAGGAGAAAACCCAATATTTTGCGATGACAAAGATGGAGTTCCAAATTCCCAAGGCAGGAAATCCTCGAACTTTCCGTTTTACAGCCCAAGTCCCTTACCGAGTCTATTCAAGAACTCACCTGCAAACTCGAGCGTGAGCTCAACGCCTTTGCGCATCTTCAAGCGCCCATTTCCTCCTCCTTCGCCGGCCAAGCACATTCGGTCATTGCTTGCTCGAAGACATGGTTCTGTGAAGCCAAACGAGGCCTCCATCCCCGAAGGAAGTGAGTGCGAAGTTGGACTCGATAAGAGCTTCGGGTTTTCGAAGCAATTCCTGGTTCATTACATGCTTGGAGAAGAAGTTGGACGTGGCCATTTTGGGTATACTTGCTCCGCCAAGGGAAAGAAAGGCAGCTTCAAGGGACTCGATGTGGCTGTCAAAGTCATCCCAAAATCCAAGATGACAACAGCTATTGCTATTGAGGACGTAAGGAGAGAAGTGAAGATATTGCGGGCTCTAACGGGACATAAGAACCTGGTGCAATTCTATGAGGCCTATGAGGATGACGACAATGTTTACATAGTTATGGAGTTATGTAAAGGAGGTGAACTCCTAGACAGAATTCTTTCCAGGGGTGGAAAGTACTCAGAAGAGGACGCCAAGGTTGTTTTGATTCAGATATTAAGTGTGGTGGCTTTCTGTCATCTTCAGGGTGTGGTTCATCGAGATCTCAAGCCGGAGAATTTTCTTTTTACATCTAAGGATGAAAACTCCACACTGAAGGCCATTGATTTTGGACTCTCTGACTATGTAAAGCCAGATGAAAGATTGAATGATATTGTGGGAAGTGCATACTATGTAGCTCCTGAAGTTTTGCATAGATCTTATGGGACTGAAGCAGACATGTGGAGCATCGGTGTAATTGCTTATATTCTTTTATGTGGAAGCCGACCTTTTTGGGCCCGGACAGAATCTGGTATATTTCGAACAGTACTGAAGGCAGATCCGAGTTTTGATGAAGCTCCATGGCCGTCTTTATCAGCTGATGCAATAGATTTTGTAAAGAGACTATTGAATAAGGATTATCGTAAGAGATTAACTGCAGCTCAGGCTCTTTGTCATCCATGGCTGGCAAATCGTCATGACGATATGAAGATACCTTTGGATTTGATAATCCCCAAGTTTGTTCGGGCTTACACATGTTCATCTTCATTACGCAAATCAGCATTAGGGGCTGTTGCAAAGACATTAACAGTAGGTCAGCTAGCTTATCTCAGACAACAATTTACACAGTTAGGGCCGAATAAAACTGGATTTATTTCAATGCAAAACTTTAAGACGGCTGTTTTGAGGAGCTCCACTGATGCCTCAAAGGATTCACGGGTCTTAGATTATGTAAACATGATTAGTTCTATCCAATATAGGAAACTAGATTTTGAGGAATTTTGTGCTGCTGCTATAAGCGTGCACCAGCTGGAGGGAATGGAGAGCTGGGAACAACAAGCAAGGCGAGCCTATGAGCTGTTTGAAAAGCGTGGAAATAGACCAATTATGATCGAAGAGCTTGCCTCGGAACTTGGGCTTAGCCCATCAGTACCTGTTCATGTGGTACTGCAAGATTGGATAAGACATGCAGATGGGAAGCTTAGTTTCTTGGGGTTTGTCAGACTTCTGCATGGGGTTTCTTCCCGCACATTTCAGAAGGCTTGA 1821 0.4437 MGFLADLSCRTRSPFGNSCALCNWVCDLMGLCHGKPNEIPQTQGGENPIFCDDKDGVPNSQGRKSSNFPFYSPSPLPSLFKNSPANSSVSSTPLRIFKRPFPPPSPAKHIRSLLARRHGSVKPNEASIPEGSECEVGLDKSFGFSKQFLVHYMLGEEVGRGHFGYTCSAKGKKGSFKGLDVAVKVIPKSKMTTAIAIEDVRREVKILRALTGHKNLVQFYEAYEDDDNVYIVMELCKGGELLDRILSRGGKYSEEDAKVVLIQILSVVAFCHLQGVVHRDLKPENFLFTSKDENSTLKAIDFGLSDYVKPDERLNDIVGSAYYVAPEVLHRSYGTEADMWSIGVIAYILLCGSRPFWARTESGIFRTVLKADPSFDEAPWPSLSADAIDFVKRLLNKDYRKRLTAAQALCHPWLANRHDDMKIPLDLIIPKFVRAYTCSSSLRKSALGAVAKTLTVGQLAYLRQQFTQLGPNKTGFISMQNFKTAVLRSSTDASKDSRVLDYVNMISSIQYRKLDFEEFCAAAISVHQLEGMESWEQQARRAYELFEKRGNRPIMIEELASELGLSPSVPVHVVLQDWIRHADGKLSFLGFVRLLHGVSSRTFQKA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1529 606 MobiDBLite consensus disorder prediction 43 67 - -
Dere02g1529 606 FunFam CDPK-related kinase 1 452 524 - -
Dere02g1529 606 FunFam Calcium-dependent protein kinase SK5 324 419 - -
Dere02g1529 606 ProSiteProfiles Protein kinase domain profile. 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1529 606 PANTHER SERINE/THREONINE-PROTEIN KINASE 139 582 - -
Dere02g1529 606 SUPERFAMILY Protein kinase-like (PK-like) 151 468 IPR011009 -
Dere02g1529 606 SMART serkin_6 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1529 606 Gene3D - 440 594 - -
Dere02g1529 606 FunFam CDPK-related kinase 1 145 240 - -
Dere02g1529 606 CDD STKc_CAMK 151 413 - -
Dere02g1529 606 ProSitePatterns Protein kinases ATP-binding region signature. 158 184 IPR017441 GO:0005524
Dere02g1529 606 FunFam CDPK-related kinase 3 144 316 - -
Dere02g1529 606 Pfam Protein kinase domain 152 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere02g1529 606 SUPERFAMILY EF-hand 444 597 IPR011992 -
Dere02g1529 606 Gene3D Phosphorylase Kinase; domain 1 154 241 - -
Dere02g1529 606 Gene3D - 434 524 - -
Dere02g1529 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Dere02g1529 606 Gene3D Transferase(Phosphotransferase) domain 1 242 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1529 Dere-ChrDere02 14995673 15000529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1529 29 604 EF-hand Containing Proteins AT3G50530 66.878 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere02g1529 Pkinase 8.2e-69 CL0016