Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1517 ATGCCGAGCTACGCTCCTCAATTGCCTTCTTCTAATTCCATGGCCATAGAAGGATCTTCTGTTCATCATTCTCAAATTCCTGAATTTGGAGCCCTAGAGCAATCTCTAGTGCGATCTCTTGGATTTCCTGCAGAGGATGCTATCAATCTTGGCAGAAATCCAATGTTCAGTCAAATTAAGTCAAATAGCCAAGCTCTTGGTGCTGATGTTCAATTTGGTGCATTAAATAAGTCAATAACAACCTCAGATATGAACCTCTCTGCTGCAATTGTGGGATCTCAGACATTGTCAATACAAAAAGACTCACAACCAAATCTGGCTTCTACATCTGCTGGCCATCATGAGAACTGGGGGGAGTCCAACATCGCAAATGGAAGCCCGAGGACTGATACTTCGACAGATGATACAGATTATAAAAATCAAAGGCCTGAAAGGGGCCAATCAACTATTGCAGTCTCTGATTCCAGTGACAGATCGAAGGATAAATCTGATCAAAAGACATTACGAAGGCTAGCTCAAAATCGGGAGGCGGCTAGAAAAAGCCGACTAAGGAAAAAGGCATATGTACAACAGTTAGAGAGTAGCAGGCTGAAACTGACCCAACTTGAGCAGGAGCTCCAGCGTGCCCGCCAGCAGGGCATTTTCATTTCAAGCACTGGTGACCAGTCACATTCAATGAGTGCAAATGGTGCTATGGCATTTGATGCAGAGTACGCACGATGGTTAGAAGAGCATAATAGGCAAATCAATGAGCTAAGAGCTGCCGTCAATTCTCATGCTGGAGATATTGAGCTGCGTACAATTGTGGACAATGTCATGTCACATTTTGATGAGATTTTCAGGCTGAAAGGTGTTGCAGCAAAAGCTGATGTTTTCCACATTCTGTCAGGAATGTGGAAGACTCCAGCTGAGAGGTGTTTCATGTGGATTGGAGGCTTCCGCTCATCAGAGCTTCTCAAGCTTCTCGTAAATCACTTGGAGCCATTAACTGAGCAACAAATGATGGGCATCTACAACTTGCAGCAGTCTTCCCAGCAGGCTGAAGATGCTTTGTCCCAAGGAATGGATGCATTGCAGCAATCACTGTCTGAGACACTTGCTAATAATTCGACCACCCCATCAGGGTCATCTGGAAACGTGGCAAATTATATGGGGCAAATGGCTATGGCCATGGGAAAGCTTGGCACTCTTGAGGGTTTTCTTCGCCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTGCGAATATTAACCACCAGGCAATCAGCTCGGGCTCTTCTTGCAATAGGTGATTACTTTTCCCGGCTACGAGCCCTAAGTTCGCTATGGCTTGCCCGACCAAGGGAATGA 1356 0.455 MPSYAPQLPSSNSMAIEGSSVHHSQIPEFGALEQSLVRSLGFPAEDAINLGRNPMFSQIKSNSQALGADVQFGALNKSITTSDMNLSAAIVGSQTLSIQKDSQPNLASTSAGHHENWGESNIANGSPRTDTSTDDTDYKNQRPERGQSTIAVSDSSDRSKDKSDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSTGDQSHSMSANGAMAFDAEYARWLEEHNRQINELRAAVNSHAGDIELRTIVDNVMSHFDEIFRLKGVAAKADVFHILSGMWKTPAERCFMWIGGFRSSELLKLLVNHLEPLTEQQMMGIYNLQQSSQQAEDALSQGMDALQQSLSETLANNSTTPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMLRILTTRQSARALLAIGDYFSRLRALSSLWLARPRE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1517 451 Coils Coil 185 212 - -
Dere02g1517 451 Gene3D - 165 217 - -
Dere02g1517 451 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 164 208 IPR004827 GO:0003700|GO:0006355
Dere02g1517 451 Pfam Basic region leucine zipper 162 208 IPR004827 GO:0003700|GO:0006355
Dere02g1517 451 Coils Coil 242 262 - -
Dere02g1517 451 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 169 184 IPR004827 GO:0003700|GO:0006355
Dere02g1517 451 CDD bZIP_HBP1b-like 166 218 - -
Dere02g1517 451 ProSiteProfiles DOG1 domain profile. 231 448 IPR025422 GO:0006351|GO:0043565
Dere02g1517 451 PANTHER TRANSCRIPTION FACTOR TGA9 105 451 - -
Dere02g1517 451 MobiDBLite consensus disorder prediction 101 131 - -
Dere02g1517 451 SUPERFAMILY Leucine zipper domain 166 209 IPR046347 GO:0003700|GO:0006355
Dere02g1517 451 MobiDBLite consensus disorder prediction 101 168 - -
Dere02g1517 451 Pfam Seed dormancy control 248 323 IPR025422 GO:0006351|GO:0043565
Dere02g1517 451 SMART brlzneu 162 225 IPR004827 GO:0003700|GO:0006355
Dere02g1517 451 FunFam BZIP family transcription factor 165 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1517 Dere-ChrDere02 14898060 14903047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1517 122 451 bZIP Transcription Factor Family AT3G12250 77.039 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Dere02g1517 DOG1 2.6e-32 No_clan