Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1510 ATGATGTTGGCATTATCCCCTCCTTTGTTCTCACCCATTGAATGGGCCTTAGATGAGTCCACAAGTCATAATAATCAGAACGCTATGTACAAAGACGCAACAACTCCTCTTCAGTTTATGTCTGCAGTTGATGAGGGTCAGTTTGAGGAGGTTCAAAGGTCTACTCCAATATCCCCCAGCGACCCCACCATGGTGAAGAAGCTTAACCACAATGCCAGTGAACGTGATCGTCGCAAGAAGATCAATAGCTTGTATTCGTCGCTTCGTTCAATGCTTCCTTTGGCAGATCAAACGAAAAAATTAAGCATTCCAGGAACAATTTCACGAGTCTTAAAATACATACCGGAGTTACAGCAGCAAGTGGAAAGGCTTGTAAAGAAAAAAGATGAGCTTTTGTTGAGAATTTCTCAACAAACAGACACAGCAAAAAGCAAAGAATCTTCAAGGAAAATTGCTCATCACAAATCTGCCACAACTTGTGTCGTTTCAACATGCAGGCTCAACGATCGCGAGGCTGTTATTCAGATTTCTTCTGATAAACTCTACAAAACTCCACTTTCTGAGATATTACTGTGTTTGGAATCGGAAGGCCTTTTACTGCTTAATGCTTCCTCCTTTGAGACATTTGGAGACAGAATCTTCTATAACTTGCATTTGCAGGTGATTAAAACTTGTTATTTAGAGTCAGACATTATAAGAGAGAAGCTTCTGTCAATACATGAAAAGAAAGAAGGGATTTTTCAATATTTCTAA 753 0.3971 MMLALSPPLFSPIEWALDESTSHNNQNAMYKDATTPLQFMSAVDEGQFEEVQRSTPISPSDPTMVKKLNHNASERDRRKKINSLYSSLRSMLPLADQTKKLSIPGTISRVLKYIPELQQQVERLVKKKDELLLRISQQTDTAKSKESSRKIAHHKSATTCVVSTCRLNDREAVIQISSDKLYKTPLSEILLCLESEGLLLLNASSFETFGDRIFYNLHLQVIKTCYLESDIIREKLLSIHEKKEGIFQYF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1510 250 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 50 237 - -
Dere02g1510 250 SMART finulus 71 123 IPR011598 GO:0046983
Dere02g1510 250 Pfam Helix-loop-helix DNA-binding domain 66 118 IPR011598 GO:0046983
Dere02g1510 250 Gene3D - 60 151 IPR036638 GO:0046983
Dere02g1510 250 CDD bHLH_AtORG2_like 66 141 - -
Dere02g1510 250 FunFam Transcription factor ORG2 61 146 - -
Dere02g1510 250 Coils Coil 114 134 - -
Dere02g1510 250 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 117 IPR011598 GO:0046983
Dere02g1510 250 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 137 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1510 Dere-ChrDere02 14841633 14843293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1510 2 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 41.065 7.29e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g1510 HLH 3e-12 No_clan