Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1504 ATGCATGAACATGGGGATGGATGGGCATGGGAAGCAAATCTTAAAAGGGAATCAAAAGAAAATGGCCTCTCTTTTGCCACCACTCTCCCCACCTGCCCAAGATATGGTAAGCGCCACATGATTTCACACCCAGGCAAAATAAAAGGCACCATTGCTGACCTCACCTGAAAGAACCATTACCCTCTTTCCATTCTGTTGCTTTTTCTCAGCCCCTCTGATCTATTCTCCTTTCCAACGATTCTGAGTTTCGTCTTGCATCCTGAATTTGTGCAAATGGGGATGGCTACAGAGTCCCAATTCCATGTTTTGGCTGTGGATGACAGCCTCATAGACAGGAAGCTGATTGAGAAGCTGCTCAAAACCTCTTCCTATCAAGTTACTACAGTGGATTCTGGTAGCAAGGCTTTGGAGTTTCTCGGTTTGCGTGAGAATGACCAGATCCACCCAAGTACGCCATCCGTTTCTCCTGGCAATCATCAGGAAGTGGAGGTGAATCTTATTATTACAGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTTAAGAAAATCAAGGAATCTTCGTCTTTGCGAAACATACCAGTGGTGATTATGTCGTCCGAGAACGTGCCTTCAAGAATTAGCAGATGTCTGGAGGAAGGAGCAAAGGAATTTTTCCTGAAGCCAGTGAGGCTGTCAGATTTGAATAAACTTCGAGCCCATCTGATGAAGACGAAGACCAAGTGTAAAGATCACAAGCCTGAAACGCAAGAAAAGCCTGAAAACCCACAAGTTCAGCGACTGCAGCAGCAACAAGAACAACAACAACAACAACAAACTCAAATTGAAGAGCAACGAGAACAACCTCCTCCATCACAGCCACTACTAGATCAACATCAACAATCGCCTCAAGCAGCCAGTAATAACAAGAGAAAGGCTATAGAACAACAGGGGCTTTCACAGGAGACTGATAGAACAAGACCAAGATACAGTGGCATAGCCACCGTGGTATGA 996 0.4508 MHEHGDGWAWEANLKRESKENGLSFATTLPTCPRYGKRHMISHPGKIKGTIADLTXKNHYPLSILLLFLSPSDLFSFPTILSFVLHPEFVQMGMATESQFHVLAVDDSLIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGLRENDQIHPSTPSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAKEFFLKPVRLSDLNKLRAHLMKTKTKCKDHKPETQEKPENPQVQRLQQQQEQQQQQQTQIEEQREQPPPSQPLLDQHQQSPQAASNNKRKAIEQQGLSQETDRTRPRYSGIATVV 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1504 331 Coils Coil 259 282 - -
Dere02g1504 331 Gene3D - 101 324 - -
Dere02g1504 331 SMART REC_2 100 233 IPR001789 GO:0000160
Dere02g1504 331 CDD REC_typeA_ARR 102 232 - -
Dere02g1504 331 ProSiteProfiles Response regulatory domain profile. 101 237 IPR001789 GO:0000160
Dere02g1504 331 PANTHER TWO-COMPONENT RESPONSE REGULATOR 100 287 IPR045279 GO:0009736
Dere02g1504 331 MobiDBLite consensus disorder prediction 237 331 - -
Dere02g1504 331 MobiDBLite consensus disorder prediction 255 322 - -
Dere02g1504 331 Pfam Response regulator receiver domain 102 231 IPR001789 GO:0000160
Dere02g1504 331 SUPERFAMILY CheY-like 99 261 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1504 Dere-ChrDere02 14780276 14782447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1504 92 331 Response Regulator Gene Family AT3G57040 63.223 1.59e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere02g1504 Response_reg 2.1e-19 CL0304