Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1478 ATGGGTGGTGATGTAACACATCCTCATCCACTCGATGATTTCAATCCATTTGTTGCTGCTGTTGTTGGCAGGATGAATTGGCCAATAGCAAACAAATATATTTCAAGAATGAGGTCTCAAACAAATAGAAAAGAGATCATCCAGGATCTTGGTGCAATGGTGGGTGAATTGCTTGATGATTTTTACCAGGAAGTGAAGAAACTCCCTAGGAGAATAATTTTCTTCAGAGATGGGGTTAGTGAAACACAGTTTTTTAAAGTACTAGAAAGGGAATTGCAATCCATCAGAGGGGCATGTTCCAAATTTCCTGGTTATAAACCTTTCATTACTTTTGCAGTAGTACAGAAAAGGCATCACAAAAGGTTGTTTCCCTTAGAAACTGACCAGTCTTCCACTCAAAATCACTTTTTATACAAGAATATTCCCCCAGGGACCATTGTTGATACTATGATCACTCACCCAAAAGAATTTGATTTCTATCTCTGCAGCCACTGTAGAGTGAAAGGAACATGTAGGCGAACTCATTACCATGTGTTGTGGGATGAAAATCAGTTCACTTCTGATGAACTACAGAAGCTGGTTTACAATTTATGTTATACTTTGTGA 606 0.3828 MGGDVTHPHPLDDFNPFVAAVVGRMNWPIANKYISRMRSQTNRKEIIQDLGAMVGELLDDFYQEVKKLPRRIIFFRDGVSETQFFKVLERELQSIRGACSKFPGYKPFITFAVVQKRHHKRLFPLETDQSSTQNHFLYKNIPPGTIVDTMITHPKEFDFYLCSHCRVKGTCRRTHYHVLWDENQFTSDELQKLVYNLCYTL 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1478 201 ProSiteProfiles Piwi domain profile. 1 201 IPR003165 GO:0003676
Dere02g1478 201 Gene3D - 1 201 IPR036397 GO:0003676
Dere02g1478 201 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 200 - -
Dere02g1478 201 SMART Piwi_a_2 1 201 IPR003165 GO:0003676
Dere02g1478 201 Pfam Piwi domain 1 200 IPR003165 GO:0003676
Dere02g1478 201 SUPERFAMILY Ribonuclease H-like 2 199 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1478 Dere-ChrDere02 14424995 14425600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1478 2 200 Eukaryotic Initiation Factors Gene Family AT1G48410 51.628 8.32e-66 216