Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1477 ATGGAGTTCCCTTTTTGTCTCATGCGGAGACTTTATAGTACTGTTGAGGCCACGGAAAGGGAAGGGAAGAGAAGGTACAGAAAGAGTAGTAAGAAAGTAAATATGGGGTTTGGCAGTGATTGTACTAAAGCATTGCTGAGATCCAATCCTATCACCCTCAGGCTGCATCCAGAAAGGAAGGAAGTAGAGAAGGCATTGAAGAACATCAGGGTCATTGTTTGCCATAGAGAAACTGTGCAGAGATACCGTGTATATGGCTTAACTGAAGAAGCTACTGAAAATCTTTGGTTTGCTGACAAGGATGGGAAGAATTTAAGGCTTGTGAGTTACTTTAAAGATCACTATAACTATGACATTCAATTTAGAAAATTTCCATGCTTGCAAATTAGTAGGAGTAAGCCATGTTATCTCCCTATGGAGCTTTGTGTGATCAGTGAAGGTCAGAAATTCCTTGGCAAGTTGTCTGATGATCAGACGGCAAAGATACTCAAGATGGGCAGCCAAAGACCAAGAGAACAGAAAGCCATAATTGAAGGAGTCATGAGAGGGAATGTGGGGCCTACCAAGTAA 570 0.4175 MEFPFCLMRRLYSTVEATEREGKRRYRKSSKKVNMGFGSDCTKALLRSNPITLRLHPERKEVEKALKNIRVIVCHRETVQRYRVYGLTEEATENLWFADKDGKNLRLVSYFKDHYNYDIQFRKFPCLQISRSKPCYLPMELCVISEGQKFLGKLSDDQTAKILKMGSQRPREQKAIIEGVMRGNVGPTK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1477 189 SUPERFAMILY PAZ domain 53 182 IPR036085 GO:0005515
Dere02g1477 189 CDD PAZ_argonaute_like 43 144 - -
Dere02g1477 189 ProSiteProfiles PAZ domain profile. 58 146 IPR003100 GO:0005515
Dere02g1477 189 FunFam Protein argonaute 7 43 150 - -
Dere02g1477 189 Pfam PAZ domain 59 162 IPR003100 GO:0005515
Dere02g1477 189 Gene3D paz domain 41 149 - -
Dere02g1477 189 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 9 180 - -
Dere02g1477 189 SMART PAZ_2_a_3 40 175 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1477 Dere-ChrDere02 14419643 14420720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1477 21 180 Eukaryotic Initiation Factors Gene Family AT1G48410 33.149 4.57e-22 91.3