Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1456 ATGGCAAAGTGGTGCTGGTTTGGATGCGGCAAAAGGCTCTCAACTTGTGAGTCGAAGCCAAAAAATTCAAAGAAATGGAAGTGTGGTCTGGCGAGGGTCAAGCTGAAACAGTATCCCATACTAACGGAACCAAACATAGCTCTAAGTGAAGCAAGAGCAGAACAGAGAAAGCATGCCTTGACAGTGGCTATTGCAACAGCAGCTGCTGCAGAAGCTGCAGTTGCTGCTGCTCATGCTGCTGCTGAGGTTGTCAGGCTCACAGGTGATTCTCGCTCTTACTCTTATCTGTCCAAGGGAGACCGAAGCTTGGCCGCCACTAAGATTCAAAGCGCATACCGTGCACATCTAGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTGTGAGACTGCAAGCCATAGTTCGTGGTCGAGCTGTGAGGCGTCAAATGCTCAACACTTTGAAGGGTTTGCCTTCCAACACAAGAAAGCAGGCAGGAATCCAGAAAAGCAGCAGTCATGCTGCAGACGGAATCAACAAAAATGACAAAAGCAAGCAGCTTCCAAAGCTGAAAAAGAAGTTGGAAGAGACGGAAATGAAGCCTGGATACCATAGTCAAAGAACTTGGGATTGCAGCTTCCGCTCAAAAGAAGACACTGAAGCCATATGGTTAAAGAAGCAAGAGGCTATTTTTAAAAGGGAGCGCATGAAGCAGTACTCTTTCTCACACCGGGTAACCTCATTTGATATGTCATATGTCTCAGAGAGAAAATTTTCCCACATGGGGGAGGAATCTATTCCCTACAAGGAATTTAGAGGAGAGAGCTGCCGTAGTTTAGGAGAATGGATGGATAAAGAAAAGTGTAAGGGAGATACGTTTTATAAAACAAATCTTCCTTTAAATTTGATCGCAAGGGAATGGTATGATACAAGACAAGTTGCAGAGAAGAGTGTGAGAAAAGAAGAATATTTGCAAGAAGACGAATTGACTTCACAGATGTCATTCCCAAGGAAGTCATTTTCTCATGTGACGAAAAGTTCAGTTGGGGACGATAATTCCATGCCAAATTCTCCAGTTTTTCCCACTTATAAGGCTGGGACAGAATCTGTGAAAGCAAAGGCAAGGTCTATGAGCACACCAAGGCAAAGAACAGGATTTCTGGATATATGGTCCGATCAGAGTGATTCTCAATGGGAAGGCTTATCTTTCAGGTCTTCTTATCATGGTGCAACTACCAGCACCAGTGGAAAAAATGAAGTTTCTCAGCAGAGATGCCAGAGTGCCAACCGCTACTACTTTCGTTAG 1284 0.4447 MAKWCWFGCGKRLSTCESKPKNSKKWKCGLARVKLKQYPILTEPNIALSEARAEQRKHALTVAIATAAAAEAAVAAAHAAAEVVRLTGDSRSYSYLSKGDRSLAATKIQSAYRAHLARKALRALKGVVRLQAIVRGRAVRRQMLNTLKGLPSNTRKQAGIQKSSSHAADGINKNDKSKQLPKLKKKLEETEMKPGYHSQRTWDCSFRSKEDTEAIWLKKQEAIFKRERMKQYSFSHRVTSFDMSYVSERKFSHMGEESIPYKEFRGESCRSLGEWMDKEKCKGDTFYKTNLPLNLIAREWYDTRQVAEKSVRKEEYLQEDELTSQMSFPRKSFSHVTKSSVGDDNSMPNSPVFPTYKAGTESVKAKARSMSTPRQRTGFLDIWSDQSDSQWEGLSFRSSYHGATTSTSGKNEVSQQRCQSANRYYFR 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1456 427 MobiDBLite consensus disorder prediction 335 355 - -
Dere02g1456 427 MobiDBLite consensus disorder prediction 151 168 - -
Dere02g1456 427 Gene3D - 101 149 - -
Dere02g1456 427 MobiDBLite consensus disorder prediction 151 181 - -
Dere02g1456 427 Pfam Protein of unknown function (DUF4005) 343 415 IPR025064 -
Dere02g1456 427 PANTHER IQ-DOMAIN 5-RELATED 25 401 - -
Dere02g1456 427 Pfam IQ calmodulin-binding motif 104 122 IPR000048 GO:0005515
Dere02g1456 427 Coils Coil 173 193 - -
Dere02g1456 427 ProSiteProfiles IQ motif profile. 101 129 IPR000048 GO:0005515
Dere02g1456 427 ProSiteProfiles IQ motif profile. 125 152 IPR000048 GO:0005515
Dere02g1456 427 SMART iq_5 100 122 IPR000048 GO:0005515
Dere02g1456 427 MobiDBLite consensus disorder prediction 402 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1456 Dere-ChrDere02 14110453 14112678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1456 6 400 IQD Protein Family AT5G03960 40.295 1.17e-53 182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1456 02 14110453 14112678 Dere02g1456 02 14110453 14112678 ECH