Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1439 ATGAGTGATGAACGGAAGTGTGAAAGATTTGGTGGGGCAACCGCCTGGGGTTTATGCTTTGGCTCGGATCAGCGTGAATCAGCCACGTTGTGGGCCTGGGCGTGGGATGCGAAAGAAGATTATCCCCTGCTTCCGCCAGTCATGAAATTACTGAACTTACATAAACTGCTTGTTGGAACTATAGTTTGTTATGACGAACTAAAGCTTGTTTCATTGTTGAAGCATGGAGCACACCATTTCAAGGGCATTGAGCTTGATCCAAGCCTTCGGAAGGATGAAATAACAAATCTTTGTTCAGGATGCTTAAGGATGATGGGTAAAGAGCTTGATGGATTGAACCTTAAAGAACTGCAGCAGCTCGAAAGTCAACTAAGTGATGGGATAATATCAGTTAAGAAGAAGAAGGAACAGATACTCCTAGAGCAACTGAGGAGGTCCAGAGTAGAGGAGCAAAAGTCCATGCTGGAGAATGAGACTCTGCGCAAACAACTTGAGGATTTGCAGAAAAAAGCGAAGACAGACTTGCTTGAGCTAAATCCTCGACATAGGAGGTCTTCCATCAAAGGTTCAAAACCTACTTTCGAATGTGCTTCAGATCATGAAAACCAGCTCTCAGGCGCTTCCTTGAAGTTGGGGTACGTTGTATAA 648 0.4444 MSDERKCERFGGATAWGLCFGSDQRESATLWAWAWDAKEDYPLLPPVMKLLNLHKLLVGTIVCYDELKLVSLLKHGAHHFKGIELDPSLRKDEITNLCSGCLRMMGKELDGLNLKELQQLESQLSDGIISVKKKKEQILLEQLRRSRVEEQKSMLENETLRKQLEDLQKKAKTDLLELNPRHRRSSIKGSKPTFECASDHENQLSGASLKLGYVV 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1439 215 MobiDBLite consensus disorder prediction 179 198 - -
Dere02g1439 215 ProSiteProfiles K-box domain profile. 80 170 IPR002487 GO:0003700|GO:0005634|GO:0006355
Dere02g1439 215 Coils Coil 150 177 - -
Dere02g1439 215 Pfam K-box region 91 164 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1439 Dere-ChrDere02 13943351 13948444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1439 91 168 MADS-box Gene Family AT5G13790 46.154 5.25e-15 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere02g1439 02 13943351 13948444 Dere02g1439 02 13943351 13948444 ECH