Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1435 ATGGAGGATGTGAAGCATAAAGAGTTGTTGGAACAAGCAAGGAAGTCCAACCCTCCACCCTTCCTGTTAAAGACATACATGCTGGTGGAGGATCCGGCCACCGACGATATCATATCTTGGAACACCGACGGCACGGCGTTCGTGGTGTGGCAGCCGGCGGAGTTCGCCCGTGACCTCCTTCCGACACTCTTCAAGCACAGCAACTTCTCAAGCTTTGTTCGACAGCTGAATACCTATGGCTTTCGTAAAATCGCAACGAGCAGATGGGAGTTCTGCAACAACCGGTTCAGGAAGGGCGAGAAAGAACTGTTATGTGAGATTCGACGAAGAAAGGCTTGGGCCAGCAAGCCACAGCCGGCGGCGCAAGCCGCGCCAAATAATCAGGAATATTCCGATGAAGATCAACGGTCTTCGTCAACCTCTTCGTCTTCTGGATATTCTACTCTTGTGGACGAGAACAGGAGACTGAAGAAAGAGAATGGAGCCTTGAGCTCTGAGCTCACGGCCATGAAGAGGAAGTGCCAGGAGCTGCTTGAGTTGGTGGCTAAGCATGCGAATAAAGACGAAGAAGACGAGAGGCCTATGCTGTTTGGGGTGAGGCTGGACGTTCGCCATGGAGAGAGGGATTTGAAGAGAAACAGAACTCATGAAAGCCCAGGCATTTTTCTGTCTCAGTCATGCAAATAG 687 0.5124 MEDVKHKELLEQARKSNPPPFLLKTYMLVEDPATDDIISWNTDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKIATSRWEFCNNRFRKGEKELLCEIRRRKAWASKPQPAAQAAPNNQEYSDEDQRSSSTSSSSGYSTLVDENRRLKKENGALSSELTAMKRKCQELLELVAKHANKDEEDERPMLFGVRLDVRHGERDLKRNRTHESPGIFLSQSCK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1435 228 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 ProSitePatterns HSF-type DNA-binding domain signature. 60 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 MobiDBLite consensus disorder prediction 120 150 - -
Dere02g1435 228 SUPERFAMILY "Winged helix" DNA-binding domain 16 110 IPR036390 -
Dere02g1435 228 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 13 184 IPR027725 -
Dere02g1435 228 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere02g1435 228 FunFam Heat stress transcription factor B-4 13 111 - -
Dere02g1435 228 Coils Coil 153 187 - -
Dere02g1435 228 MobiDBLite consensus disorder prediction 115 151 - -
Dere02g1435 228 Gene3D - 12 111 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1435 Dere-ChrDere02 13880338 13882081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1435 18 184 HSF AT2G41690 60.000 2.67e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere02g1435 HSF_DNA-bind 5.4e-32 CL0123