Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1434 ATGGCTTCTTCTTCCTCTGATCCTGGCAAGTCCGAAGCTGGTTGTGCCATGGCAGAGACTTCGGAACCAGCGATGACCAACGATCAGGTGTTGTTATACAGGGAATTCAAGAAGGCGAAGAAGGAGAGAGGATGTACGGCCAAAGAGCGAATCAGCAAGATGCCTCCTTGTACTGCCGGCAAACGCAGCTCCATATATCGTGGTGTTACCAGGCATAGATGGACTGGTCGTTATGAAGCACATCTTTGGGATAAAAGCACATGGAACCAAAATCAGAACAAGAAAGGAAAGCAAGTATACTTGGGGGCATATGACGATGAAGAGGCTGCAGCTAGAGCATATGACCTAGCGGCTCTAAAATATTGGGGTCCAGGGACTCTCATTAATTTTCCAGTGACTGATTATACGAGAGATCTTGACGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTCTACGACGGAAGAGCAGTGGTTTTTCAAGAGGAATCTCAAAATATCGTGGACTCTCTAGTCGATGGGAACCATCATATGGTCGTATGGCTGGATCTGACTACGTCAATAGTAAACATTATGGTGATGATTCAGCTGCAGAAAGAGAATATTTAAGTGGTTTCTGCGTAGATAGAAAAATTGATCTAACAAGTTACATCAAATGGTGGGGATCTAACAAGAGTAGCCAACATGATCCTGGAACAAAATCATCAGAAGAAAAAAAGCGAAGTTTTGCTGGAGATCATTGCAGCGAACTTAGAACACTGGAACAGCAAGTCCAACCTACCGAACCATACCAGATGCCACAGTTAGGCATGCCCCATGATGGAAAAAAGCATAAAAGTTCTTCAGTTTCTGCCATAAGTATCTTGTCCCGATCAGCTGCCTACAAGAGCTTGCAAGAGAAAGCATCAATGAGAGAGGAAAACAGCATTGACCCCAATGAAAATGAAAACAAAAAAACCATCGATAAGTTGGACCGTGGCAAAGCAGTCGAGAAATCATCAAATCATGATGGTGGTGGCAATGAAAGACCTGAATCTGCAATGGGAATGAGTGGGGCATTGTCTCTTCAAAAAAATGTTTACAACCCTTTGGCTCCATTCTTGTCCGCACCGCTCTTGACAGCTTATAATACTGTTGATCCCTTAGTAGATCCTGTTCTCTGGACATCTCTTGTTCCTATGCTTCCTGCTGGCTTGTCCCGTAACGCTGAGGTTACAAAGACTGAGACCAGTTCATCGTACACCATATTTCATCCAGAGGAGTGA 1269 0.4389 MASSSSDPGKSEAGCAMAETSEPAMTNDQVLLYREFKKAKKERGCTAKERISKMPPCTAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYTRDLDEMQNFSREEYLASLRRKSSGFSRGISKYRGLSSRWEPSYGRMAGSDYVNSKHYGDDSAAEREYLSGFCVDRKIDLTSYIKWWGSNKSSQHDPGTKSSEEKKRSFAGDHCSELRTLEQQVQPTEPYQMPQLGMPHDGKKHKSSSVSAISILSRSAAYKSLQEKASMREENSIDPNENENKKTIDKLDRGKAVEKSSNHDGGGNERPESAMGMSGALSLQKNVYNPLAPFLSAPLLTAYNTVDPLVDPVLWTSLVPMLPAGLSRNAEVTKTETSSSYTIFHPEE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1434 422 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 29 305 - -
Dere02g1434 422 ProSiteProfiles AP2/ERF domain profile. 65 131 IPR001471 GO:0003700|GO:0006355
Dere02g1434 422 MobiDBLite consensus disorder prediction 1 22 - -
Dere02g1434 422 SMART rav1_2 65 137 IPR001471 GO:0003700|GO:0006355
Dere02g1434 422 SUPERFAMILY DNA-binding domain 64 132 IPR016177 GO:0003677
Dere02g1434 422 PRINTS Ethylene responsive element binding protein signature 113 133 IPR001471 GO:0003700|GO:0006355
Dere02g1434 422 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Dere02g1434 422 MobiDBLite consensus disorder prediction 301 340 - -
Dere02g1434 422 MobiDBLite consensus disorder prediction 225 284 - -
Dere02g1434 422 Gene3D AP2/ERF domain 65 133 IPR036955 GO:0003700|GO:0006355
Dere02g1434 422 MobiDBLite consensus disorder prediction 300 350 - -
Dere02g1434 422 Pfam AP2 domain 65 123 IPR001471 GO:0003700|GO:0006355
Dere02g1434 422 FunFam AP2-like ethylene-responsive transcription factor 64 133 - -
Dere02g1434 422 MobiDBLite consensus disorder prediction 232 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1434 Dere-ChrDere02 13873967 13877272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1434 28 406 AP2-EREBP Transcription Factor Family AT2G41710 62.982 4.75e-154 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere02g1434 AP2 1.1e-13 CL0081