Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere02g1402 | ATGGCTGACCCTTTCTCCAATTTCTTCTCTTCATCATCCGGATTTTTTCACTTCAATCCCATCCCCCGTTATTATCCTCCTCCTCCTCCTGCCCCTTCTCCCCACCACCATCCCTATCTCCACAACTTCATCGCTTCTTCTTCACCTCCTACTTCCCCTCCTCTTCGAGAAGCCCTTCCCCTTCTCAACCCCTCCAAGCATCAACAACAGCATCATCAAGATCACCAGCAACATGCTTGCAGTAGTCCTATGGAAGTGGAGGACACTGCTACTAAGCCCAAAGAAGAAGACGACGAAGAAGAAGAGGATGAGGATGAGAATAGTGTGACTGTTGCACTCCATATAGGGCTGCCTAGCCCTAGTGCTGCCGAGATGGCCTCTCTCCTCTCGTCTTCCTCCACTCAAACACAACAAGCAGTAGATGGTGAGACTCTTGAGGATAATTCTTCTTCTGGCCTCCCCAGGCTCAACAAGGGCCAGTACTGGATCCCTACCCCTTCTCAGATTCTCATTGGTCCTACCCAGTTCTCTTGCCCTGTTTGCTCCAAAACCTTCAACCGCTACAACAACATGCAGATGCATATGTGGGGGCATGGATCACAATACAGAAAAGGGCCAGAATCTCTGAGGGGTACTCAACCAACGGGAATGCTGAGGCTTCCTTGCTATTGCTGTGCCCCAGGGTGCAGGAACAACATTGACCACCCAAGGGCAAAGCCCCTCAAGGATTTTAGAACCCTTCAAACACACTACAAGAGGAAGCATGGGATTAAGCCCTTCATGTGCAGAAAATGTGGCAAGGCTTTCGCTGTGAGAGGGGATTGGAGAACCCATGAGAAGAACTGTGGGAAGCTTTGGTACTGTATTTGTGGCTCTGATTTCAAGCACAAGAGGTCCCTTAAAGATCATATCAAGGCTTTTGGGAGTGGCCATGCTGCTTACGGGATTGATGGCTTTGAAGAAGAAGATGAGCCAGCATCTGAAGTAGAGCAAGATAATGATTCCACCTACTAA | 1014 | 0.4921 | MADPFSNFFSSSSGFFHFNPIPRYYPPPPPAPSPHHHPYLHNFIASSSPPTSPPLREALPLLNPSKHQQQHHQDHQQHACSSPMEVEDTATKPKEEDDEEEEDEDENSVTVALHIGLPSPSAAEMASLLSSSSTQTQQAVDGETLEDNSSSGLPRLNKGQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPASEVEQDNDSTY | 337 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere02g1402 | 337 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 176 | 203 | IPR013087 | - | |
Dere02g1402 | 337 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 178 | 198 | IPR013087 | - | |
Dere02g1402 | 337 | SUPERFAMILY | beta-beta-alpha zinc fingers | 242 | 280 | IPR036236 | - | |
Dere02g1402 | 337 | MobiDBLite | consensus disorder prediction | 123 | 157 | - | - | |
Dere02g1402 | 337 | PANTHER | ZINC FINGER PROTEIN WIP2 | 30 | 333 | IPR043584 | GO:0003700|GO:0010468 | |
Dere02g1402 | 337 | MobiDBLite | consensus disorder prediction | 124 | 157 | - | - | |
Dere02g1402 | 337 | FunFam | Zinc finger protein WIP2 | 229 | 311 | - | - | |
Dere02g1402 | 337 | SUPERFAMILY | beta-beta-alpha zinc fingers | 172 | 198 | IPR036236 | - | |
Dere02g1402 | 337 | MobiDBLite | consensus disorder prediction | 92 | 107 | - | - | |
Dere02g1402 | 337 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 260 | 280 | IPR013087 | - | |
Dere02g1402 | 337 | Gene3D | Classic Zinc Finger | 238 | 312 | - | - | |
Dere02g1402 | 337 | Gene3D | Classic Zinc Finger | 175 | 198 | - | - | |
Dere02g1402 | 337 | SMART | c2h2final6 | 176 | 198 | IPR013087 | - | |
Dere02g1402 | 337 | SMART | c2h2final6 | 260 | 280 | IPR013087 | - | |
Dere02g1402 | 337 | FunFam | zinc finger protein WIP2-like | 175 | 198 | - | - | |
Dere02g1402 | 337 | MobiDBLite | consensus disorder prediction | 36 | 109 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere02g1402 | Dere-ChrDere02 | 13527272 | 13529523 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere02g1402 | 1 | 334 | C2H2 Transcription Factor Family | AT3G57670 | 65.000 | 6.01e-143 | 407 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Dere02g1402 | None | None | None |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere01g2465 | 01 | 39244368 | 39246551 | Dere02g1402 | 02 | 13527272 | 13529523 | CCT | |
Dere02g1402 | 02 | 13527272 | 13529523 | Dere02g1402 | 02 | 13527272 | 13529523 | ECH |