Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1397 ATGGTTCTTGGGGTGGAGAGAACAGCATCTCAACAGGAAATAAAGAAAGCATACTACAAGTTGGCGTTGCGGCTCCATCCTGATAAGAACCCTGGCGATGAGGAAGCTAAAGAGAAATTTCAGCAATTGCAAAAGGTGATCTCAATTCTTGGGGATGAAGAGAAACGGGCACTTTATGATCAAACCGGTTGTGTTGATGATGCAGACCTTGCTGGGGAAGTTGTTCAGAACCTTCATGAGTTCCTTAGAACAATGTACAAGAAGGTCACTGAAGCTGATATCGAGGAATTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAGAATGATTTGATTGCTCTGTACATGGAGTGCAAGGGTAATATGAAGAGGCTTTTCTGTTCAATGCTATGTTCGGATCCTAAACTTGACTCACACCGATTCAAGGACATTCTTGATGAGGCTATAGCTGCTGGTGAGAATATTACTAGCTTTGTAGGCCCAGGAGAACTAAAGGCAACAAAAACCTACCAGAAATGGTCAAAGGAAATATCTAAAATAAAACCCCCAACTAGTCCTTTAATGAGGAGGAAAAGGTCAAATATGCAGTTGGAATCAGATCCGTATGCAATCATTTCAAAGCGCCGAACTGAGAGAAAAGATCGGTTTGATTCTATGTTCTCTTCTCTAGTTTCAAAATATGGTGGAGGCGATATACCAGAACCCACTGAAGAAGAGTTTGAAGCTGCACAGAGAAAATTGGAAAGACGAAGTACAACTCGTGTCCTAGTGATTTCTTCTCATCAGAAACTTGATGTGACTGGTACAAGGACTGTGACACCGCAACTACGTGCTAGGAACATTCCCAATGGAACCTATTCAAGACTGTCCGAACTCATTCTCATGCGATGTTTGCTTTCCCTAATTAATGCTCTTCAAGCTTGCGGTTGTCTTCAAGTAGAGCATTCGGGGTGA 954 0.4235 MVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEEAKEKFQQLQKVISILGDEEKRALYDQTGCVDDADLAGEVVQNLHEFLRTMYKKVTEADIEEFEANYRGSDSEKNDLIALYMECKGNMKRLFCSMLCSDPKLDSHRFKDILDEAIAAGENITSFVGPGELKATKTYQKWSKEISKIKPPTSPLMRRKRSNMQLESDPYAIISKRRTERKDRFDSMFSSLVSKYGGGDIPEPTEEEFEAAQRKLERRSTTRVLVISSHQKLDVTGTRTVTPQLRARNIPNGTYSRLSELILMRCLLSLINALQACGCLQVEHSG 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1397 317 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 2 252 IPR042977 -
Dere02g1397 317 SMART dnaj_3 2 55 IPR001623 -
Dere02g1397 317 CDD DnaJ 2 52 IPR001623 -
Dere02g1397 317 Gene3D DnaJ domain 1 77 IPR036869 -
Dere02g1397 317 ProSiteProfiles dnaJ domain profile. 1 63 IPR001623 -
Dere02g1397 317 SUPERFAMILY Chaperone J-domain 2 69 IPR036869 -
Dere02g1397 317 PRINTS DnaJ domain signature 18 33 IPR001623 -
Dere02g1397 317 PRINTS DnaJ domain signature 35 55 IPR001623 -
Dere02g1397 317 PRINTS DnaJ domain signature 55 74 IPR001623 -
Dere02g1397 317 Pfam DnaJ domain 2 60 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1397 Dere-ChrDere02 13485592 13490681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1397 2 60 C2H2 Transcription Factor Family AT1G74250 39.062 2.00e-06 47.4