Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1396 ATGGGTTTTTCTCGTTTCCATAATTCAGTTGGAAATTGGTTTCAACCTGGTATATTTTACTTCAATAATAAAACTAATCTACGGAAGCTTGCTCATCTTGGTCGTGGGTGGCTGGGTTTTGTTTGCATGCTTAAAGTAGAAGTAAATATTGATTGGGAATATACTTCTTTTGCTTTTGTCTATCTTCTTTACAGATGGAGAGGTGCTTTGCTTGCAGGTGGTTGTAAAATAATGGAGTCTCACGATGAGACAGGATGCCAGGCACCAGATTGCACCATTCTTTGCATTAACAATTGTGGCTTCTTTGGCAGAGCTGCTACAATGAATATGTGTTCCAAATGTTACAAGGACATGCTGTTGAAGCAGGACCAGGCTAAACTTGCAGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTAGCAGCAATGGGAAAGAGGCTGCGACTGCCTGTGCTACTAATGTGCAAGTTGGAACTGTGGAGCTCAAGACAGTCCATGCCGAAGTTTGTCAGGATTCGTCCTCTAGTGAGAGTTTGGAGATGAAAGTCAAGACAGGTCCCAGCAGATGTACCACTTGCCGGAAGCGTGTTGGATTAACTGGTTTTAGCTGCAAATGTGGAAACATCTTTTGTGCAACACATCGCTATACTGACAAACATGATTGCCCTTTTGATTATCGGACTGTTGGTCAGGATGCTATAGCTAAAGCCAACCCCGTAATAAAGGCAGAAAAGCTTGACAAAATCTAG 750 0.424 MGFSRFHNSVGNWFQPGIFYFNNKTNLRKLAHLGRGWLGFVCMLKVEVNIDWEYTSFAFVYLLYRWRGALLAGGCKIMESHDETGCQAPDCTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSNGKEAATACATNVQVGTVELKTVHAEVCQDSSSSESLEMKVKTGPSRCTTCRKRVGLTGFSCKCGNIFCATHRYTDKHDCPFDYRTVGQDAIAKANPVIKAEKLDKI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1396 249 Pfam A20-like zinc finger 93 116 IPR002653 GO:0003677|GO:0008270
Dere02g1396 249 Gene3D - 164 245 IPR035896 -
Dere02g1396 249 ProSiteProfiles Zinc finger A20-type profile. 89 123 IPR002653 GO:0003677|GO:0008270
Dere02g1396 249 PANTHER AN1-TYPE ZINC FINGER PROTEIN 93 249 - -
Dere02g1396 249 SUPERFAMILY AN1-like Zinc finger 178 244 IPR035896 -
Dere02g1396 249 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 94 132 - -
Dere02g1396 249 Gene3D - 77 150 - -
Dere02g1396 249 FunFam Zinc finger AN1-type containing 6 163 245 - -
Dere02g1396 249 ProSiteProfiles Zinc finger AN1-type profile. 184 230 IPR000058 GO:0008270
Dere02g1396 249 SMART AN1_Zf_4 190 227 IPR000058 GO:0008270
Dere02g1396 249 SMART A20_3 92 116 IPR002653 GO:0003677|GO:0008270
Dere02g1396 249 Pfam AN1-like Zinc finger 190 226 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1396 Dere-ChrDere02 13468521 13469615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1396 82 249 C2H2 Transcription Factor Family AT3G52800 42.353 8.66e-39 131