Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere02g1390 ATGGAGCAAACTACAGGAGGCTTGCCCGGATCCACTCTTGCTATTCGCGAACACGATAAGACCGCACTCGAATCCATCCAATTTAACCAAGAAATCCAGGGAATCATGGCCCCACCCCCTGAAAACGCGAGCTCCTTCACTGCACTTCTTGAACTCCCACCAACGCAGGCCGTCGAGCTCCTTCACTCGCCGGACTGTGGCGGAACCGACGCCACCAGTAGGCCGTCCGGGAAATCCCCATGTCAAATCAACAATGAAAAACCCTATCTATTCCACTCTTTGAGTGGCAATTTAACCTTTCCTGCAAACGCTGCTTTGATCGAGCGCGCCGCCAAGTTCTCCGTATTTGCTGGAGAAAACGCACACCCGGAGGATCCTAGCTTGGTTGCTCTTAATTCAGTCGCAAATTTGGATAAAGTGAAGAATGAACCCCCAGAAACCGATTCAAATCCTTGTTCAATGCAGGGCTGTGTTTCTGATCCCGCCGTTGAGAACCAGAACCAGAGAGCCGCAAAGAGGAAGGACCGAGAGAAGAAGGTTAAAGGGTCCTCGAAGAAGAGTAAGGGCGTCGCCGACGAGGCCTCCGCGGATGCTGAAAAGCTTCCCTACGTTCATGTTCGAGCTCGTCGTGGTCAAGCTACAGACAGCCATAGCTTAGCAGAGAGGGCTAGGAGAGAGAAGATAAATGCGCGGATGAAACTTTTACAAGAGCTGGTCCCCGGCTGCAACAAGATATCAGGAACAGCATTGGTTCTGGATGAAATCATCAACCATGTGCAATCTCTACAACGTCAAGTGGAGTTCTTATCAATGAAACTGGCTGCAGTTAATCCAAGAATTGATTTCAACCTTGACAGCATATTGGCCACAGAAGGTGCATCTCTAATGGACTGTAACTTCCCCAGCATGGTTACGCCTCTGATGTGGCCAGAAATCCCAATTAATGGAAATAGACAGCAATATCAACAACAGTGGCAAGTTGACGCATTCCACCAAACACTTTGGGGGAGGGAAGAAGGGAACCATAATTTTATCACTCCAGATAACTCTTTTTTGAGCTATGACTCGTCTGCAAATTCAGCGTCTCTGCACTCAAATCAGTTGAAGATGGAGCTGTGA 1119 0.4888 MEQTTGGLPGSTLAIREHDKTALESIQFNQEIQGIMAPPPENASSFTALLELPPTQAVELLHSPDCGGTDATSRPSGKSPCQINNEKPYLFHSLSGNLTFPANAALIERAAKFSVFAGENAHPEDPSLVALNSVANLDKVKNEPPETDSNPCSMQGCVSDPAVENQNQRAAKRKDREKKVKGSSKKSKGVADEASADAEKLPYVHVRARRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDEIINHVQSLQRQVEFLSMKLAAVNPRIDFNLDSILATEGASLMDCNFPSMVTPLMWPEIPINGNRQQYQQQWQVDAFHQTLWGREEGNHNFITPDNSFLSYDSSANSASLHSNQLKMEL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere02g1390 372 Coils Coil 252 272 - -
Dere02g1390 372 MobiDBLite consensus disorder prediction 182 196 - -
Dere02g1390 372 MobiDBLite consensus disorder prediction 146 166 - -
Dere02g1390 372 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 281 IPR036638 GO:0046983
Dere02g1390 372 Pfam Helix-loop-helix DNA-binding domain 216 263 IPR011598 GO:0046983
Dere02g1390 372 CDD bHLH_AtBPE_like 202 287 - -
Dere02g1390 372 Gene3D - 209 282 IPR036638 GO:0046983
Dere02g1390 372 FunFam transcription factor bHLH48-like isoform X1 209 281 - -
Dere02g1390 372 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 212 262 IPR011598 GO:0046983
Dere02g1390 372 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 114 356 IPR024097 GO:0006355
Dere02g1390 372 MobiDBLite consensus disorder prediction 140 196 - -
Dere02g1390 372 SMART finulus 218 268 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere02g1390 Dere-ChrDere02 13422307 13427078 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere02g1390 22 372 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 56.992 6.07e-111 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere02g1390 HLH 1.4e-05 No_clan